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Loss of introns along the evolutionary diversification pathway of snake venom disintegrins evidenced by sequence analysis of genomic DNA from Macrovipera lebetina transmediterranea and Echis ocellatus

Authors :
Robert A. Harrison
Amine Bazaa
N. Marrakchi
Juan J. Calvete
Paula Juárez
Mohamed El Ayeb
Libia Sanz
Zakaria Bel Lasfer
Laboratoire des Venins et Toxines, Institut Pasteur de Tunis
Institut Pasteur de Tunis
Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP)
Instituto de biomedicina [Valencia] (IBV)
Consejo Superior de Investigaciones Científicas [Madrid] (CSIC)
Alistair Reid Venom Research Unit
Liverpool School of Tropical Medicine (LSTM)
This study was partly financed by Grant BFU2004-01432/BMC from the Ministerio de Educacion y Ciencia, Madrid, Spain, and by Spanish-Tunisian Cooperation Programme 29p/02 of the Agencia Espanola de Cooperacion Internacional (AECI). P.J. is the recipient of a predoctoral fel-lowship from the Formacion de Personal Investigador (FPI) program from the Ministerio de Educacion y Ciencia, Madrid.
Source :
Journal of Molecular Evolution, Journal of Molecular Evolution, Springer Verlag, 2007, 64 (2), pp.261-271. ⟨10.1007/s00239-006-0161-4⟩
Publication Year :
2007
Publisher :
HAL CCSD, 2007.

Abstract

International audience; Analysis of cDNAs from Macrovipera lebetina transmediterranea (Mlt) and Echis ocellatus (Eo) venom gland libraries encoding disintegrins argued strongly for a common ancestry of the messengers of short disintegrins and those for precursors of dimeric disintegrin chains. We now report the sequence analysis of disintegrin-coding genes from these two vipers. Genomic DNAs for dimeric disintegrin subunits Ml_G1 and Ml_G2 (Mlt) and Eo_D3 ( Eo) contain single 1-kb introns exhibiting the 5'-GTAAG (donor)/3'-AG ( acceptor) consensus intron splicing signature. On the other hand, the short RTS-disintegrins M1_G3 ( Mlt) and Eo_RTS ( Eo) and the short RGD-disintegrin ocellatusin (Eo) are transcribed from intronless genomic DNA sequences, indicating that the evolutionary pathway leading to the emergence of short disintegrins involved the removal of all intronic sequences. The insertion position of the intron within Ml_G1, Ml_G2, and Eo_D3 is conserved in the genes for vertebrate ADAM ( A disintegrin and metalloproteinase) protein disintegrinlike domains and within the gene for the medium-size snake disintegrins halystatins 2 and 3. However, a comparative analysis of currently available disintegrin(-like) genes outlines the view that a minimization of both the gene organization and the protein structure underlies the evolution of the snake venom disintegrin family.

Details

Language :
English
ISSN :
00222844 and 14321432
Database :
OpenAIRE
Journal :
Journal of Molecular Evolution, Journal of Molecular Evolution, Springer Verlag, 2007, 64 (2), pp.261-271. ⟨10.1007/s00239-006-0161-4⟩
Accession number :
edsair.doi.dedup.....c3e35e992ca4a7c9b45e326362f32bbf