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Crystal structure of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) frameshifting pseudoknot
- Source :
- RNA. 28:239-249
- Publication Year :
- 2021
- Publisher :
- Cold Spring Harbor Laboratory, 2021.
-
Abstract
- SARS-CoV-2 produces two long viral protein precursors from one open reading frame using a highly conserved RNA pseudoknot that enhances programmed −1 ribosomal frameshifting. The 1.3 Å-resolution X-ray structure of the pseudoknot reveals three coaxially stacked helices buttressed by idiosyncratic base triples from loop residues. This structure represents a frameshift-stimulating state that must be deformed by the ribosome and exhibits base-triple-adjacent pockets that could be targeted by future small-molecule therapeutics.
- Subjects :
- Models, Molecular
Translational frameshift
SARS-CoV-2
Viral protein
viruses
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
Frameshifting, Ribosomal
RNA
Crystal structure
Computational biology
Biology
Crystallography, X-Ray
medicine.disease_cause
Ribosome
Open reading frame
Mutation
Codon, Terminator
medicine
Nucleic Acid Conformation
RNA, Viral
Pseudoknot
Molecular Biology
Subjects
Details
- ISSN :
- 14699001 and 13558382
- Volume :
- 28
- Database :
- OpenAIRE
- Journal :
- RNA
- Accession number :
- edsair.doi.dedup.....c46999547a7a1aa66151b9f69fdf5ef2
- Full Text :
- https://doi.org/10.1261/rna.078825.121