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Transcriptomic Sequencing Reveals a Set of Unique Genes Activated by Butyrate-Induced Histone Modification
- Source :
- Gene Regulation and Systems Biology, Vol 10 (2016), Gene Regulation and Systems Biology, Gene Regulation and Systems Biology, Vol 2016, Iss 10, Pp 1-8 (2016)
- Publication Year :
- 2016
- Publisher :
- SAGE Publishing, 2016.
-
Abstract
- Butyrate is a nutritional element with strong epigenetic regulatory activity as a histone deacetylase inhibitor. Based on the analysis of differentially expressed genes in the bovine epithelial cells using RNA sequencing technology, a set of unique genes that are activated only after butyrate treatment were revealed. A complementary bioinformatics analysis of the functional category, pathway, and integrated network, using Ingenuity Pathways Analysis, indicated that these genes activated by butyrate treatment are related to major cellular functions, including cell morphological changes, cell cycle arrest, and apoptosis. Our results offered insight into the butyrate-induced transcriptomic changes and will accelerate our discerning of the molecular fundamentals of epigenomic regulation.
- Subjects :
- 0301 basic medicine
medicine.drug_class
Butyrate
bovine cells
Bioinformatics
Transcriptome
03 medical and health sciences
0302 clinical medicine
Genetics
Medicine
histone modification
Epigenetics
Molecular Biology
Gene
lcsh:QH301-705.5
Ecology, Evolution, Behavior and Systematics
Original Research
Epigenomics
Regulation of gene expression
biology
business.industry
Histone deacetylase inhibitor
transcriptomic
butyrate
Computer Science Applications
Cell biology
030104 developmental biology
Histone
lcsh:Biology (General)
biology.protein
gene regulation
business
030217 neurology & neurosurgery
Subjects
Details
- Language :
- English
- ISSN :
- 11776250
- Volume :
- 10
- Database :
- OpenAIRE
- Journal :
- Gene Regulation and Systems Biology
- Accession number :
- edsair.doi.dedup.....c46b6c96397363ca2d5bd6bae76bdd8d