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Replicate Phylogenies and Post-Glacial Range Expansion of the Pitcher-Plant Mosquito, Wyeomyia smithii, in North America
- Source :
- PLoS ONE, PLoS ONE, Vol 8, Iss 9, p e72262 (2013)
- Publication Year :
- 2013
- Publisher :
- Public Library of Science, 2013.
-
Abstract
- Herein we tested the repeatability of phylogenetic inference based on high throughput sequencing by increased taxon sampling using our previously published techniques in the pitcher-plant mosquito, Wyeomyia smithii in North America. We sampled 25 natural populations drawn from different localities nearby 21 previous collection localities and used these new data to construct a second, independent phylogeny, expressly to test the reproducibility of phylogenetic patterns. Comparison of trees between the two data sets based on both maximum parsimony and maximum likelihood with Bayesian posterior probabilities showed close correspondence in the grouping of the most southern populations into clear clades. However, discrepancies emerged, particularly in the middle of W. smithii's current range near the previous maximum extent of the Laurentide Ice Sheet, especially concerning the most recent common ancestor to mountain and northern populations. Combining all 46 populations from both studies into a single maximum parsimony tree and taking into account the post-glacial historical biogeography of associated flora provided an improved picture of W. smithii's range expansion in North America. In a more general sense, we propose that extensive taxon sampling, especially in areas of known geological disruption is key to a comprehensive approach to phylogenetics that leads to biologically meaningful phylogenetic inference.
- Subjects :
- 0106 biological sciences
Canada
Range (biology)
Biogeography
lcsh:Medicine
010603 evolutionary biology
01 natural sciences
03 medical and health sciences
Phylogenetics
Animals
Clade
lcsh:Science
Phylogeny
030304 developmental biology
0303 health sciences
Likelihood Functions
Multidisciplinary
biology
Models, Genetic
Ecology
lcsh:R
High-Throughput Nucleotide Sequencing
Reproducibility of Results
Bayes Theorem
Sequence Analysis, DNA
biology.organism_classification
United States
Maximum parsimony
Phylogeography
Culicidae
Phylogenetic Pattern
lcsh:Q
Animal Distribution
Wyeomyia smithii
Research Article
Subjects
Details
- Language :
- English
- ISSN :
- 19326203
- Volume :
- 8
- Issue :
- 9
- Database :
- OpenAIRE
- Journal :
- PLoS ONE
- Accession number :
- edsair.doi.dedup.....c4a1f3ded3d744bb4a79ad33b0765ab0