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Actinomadura rubteroloni sp. nov. and Actinomadura macrotermitis sp. nov., isolated from the gut of the fungus growing-termite Macrotermes natalensis
- Source :
- International journal of systematic and evolutionary microbiology, 70 (10), 5255-5262, International Journal of Systematic and Evolutionary Microbiology
- Publication Year :
- 2020
- Publisher :
- Elsevier, 2020.
-
Abstract
- The taxonomic positions of two novel aerobic, Gram-positive actinobacteria, designated strains RB29T and RB68T, were determined using a polyphasic approach. Based on 16S rRNA gene sequence analysis, the closest phylogenetic neighbours of RB29T were identified as Actinomadura rayongensis DSM 102126T (99.2 % similarity) and Actinomadura atramentaria DSM 43919T (98.7 %), and for strain RB68T was Actinomadura hibisca DSM 44148T (98.3 %). Digital DNA–DNA hybridization (dDDH) between RB29T and its closest phylogenetic neighbours, A. rayongensis DSM 102126T and A. atramentaria DSM 43919T, resulted in similarity values of 53.2 % (50.6–55.9 %) and 26.4 % (24.1–28.9 %), respectively. Additionally, the average nucleotide identity (ANI) was 93.2 % (94.0 %) for A. rayongensis DSM 102126T and 82.3 % (78.9 %) for A. atramentaria DSM 43919T. dDDH analysis between strain RB68T and A. hibisca DSM 44148T gave a similarity value of 24.5 % (22.2–27.0 %). Both strains, RB29T and RB68T, revealed morphological characteristics and chemotaxonomic features typical for the genus Actinomadura , such as the presence of meso-diaminopimelic acid in the cell wall, galactose and glucose as major sugar components within whole-cell hydrolysates and the absence of mycolic acids. The major phospholipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and phosphatidylinositol mannoside. Predominant menaquinones were MK-9(H6) and MK-9(H8) for RB29T and MK-9(H4) and MK-9(H6) for RB68T. The main fatty acids were identified as 10-methyloctadecanoic acid (10-methyl C18:0), 14-methylpentadecanoic acid (iso-C16:0), hexadecanoic acid (C16:0) and cis-9-octadecanoic acid (C18 : 1 ω9c). Here, we propose two novel species of the genus Actinomadura : Actinomadura rubteroloni sp. nov. with the type strain RB29T (=CCUG 72668T=NRRL B-65537T) and Actinomadura macrotermitis sp. nov. with the type strain RB68T (=CCUG 72669T=NRRL B-65538T).
- Subjects :
- Life sciences
biology
termite gut
New Taxa
Macrotermes natalensis
Shotgun sequencing
Strain (biology)
Actinomadura
General Medicine
Fungus
biology.organism_classification
16S ribosomal RNA
Microbiology
Actinobacteria
new natural products
Taxonomic Description
GenBank
ddc:570
Botany
Gene
Ecology, Evolution, Behavior and Systematics
Subjects
Details
- Language :
- English
- ISSN :
- 14665026 and 14665034
- Database :
- OpenAIRE
- Journal :
- International journal of systematic and evolutionary microbiology, 70 (10), 5255-5262, International Journal of Systematic and Evolutionary Microbiology
- Accession number :
- edsair.doi.dedup.....c85122666c68ac68a1dbbcc72d6885d7