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Genome sequence of the Wenxinia marina type strain (DSM 24838 T ), a representative of the Roseobacter group isolated from oilfield sediments
- Source :
- Standards in Genomic Sciences, Standards in Genomic Sciences, 2014, 9 (3), pp.855-865. ⟨10.4056/sigs.5601028⟩, Web of Science
- Publication Year :
- 2014
- Publisher :
- HAL CCSD, 2014.
-
Abstract
- International audience; Wenxinia marina Ying et al. 2007 is the type species of the genus Wenxinia, a representative of the Roseobacter group within the alphaproteobacterial family Rhodobacteraceae, isolated from oilfield sediments of the South China Sea. This family was shown to harbor the most abundant bacteria especially from coastal and polar waters, but was also found in microbial mats, sediments and attached to different kind of surfaces. Here we describe the features of W. marina strain HY34 T together with the genome sequence and annotation of strain DSM 24838 T and novel aspects of its phenotype. The 4,181,754 bp containing genome sequence encodes 4,047 protein-coding genes and 59 RNA genes. The genome of W. marina DSM 24838 T was sequenced as part of the activities of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project funded by the DoE and the Transregional Collaborative Research Centre 51 (TRR51) funded by the German Research Foundation (DFG).
- Subjects :
- Genetics
Whole genome sequencing
biology
prophage-like structures
Alphaproteobacteria
quorum sensing
Roseobacter
biology.organism_classification
autoinducer
Genome
[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology
Short Genome Reports
aerobic
Roseobacter group
Type species
14. Life underwater
Microbial mat
Rhodobacteraceae
rod-shaped
Gene
heterotrophic
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Journal :
- Standards in Genomic Sciences, Standards in Genomic Sciences, 2014, 9 (3), pp.855-865. ⟨10.4056/sigs.5601028⟩, Web of Science
- Accession number :
- edsair.doi.dedup.....c8e0dd7fed0d034fef8f105d600c5152
- Full Text :
- https://doi.org/10.4056/sigs.5601028⟩