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Genome sequence of the Wenxinia marina type strain (DSM 24838 T ), a representative of the Roseobacter group isolated from oilfield sediments

Authors :
Tanja Woyke
Hans-Peter Klenk
Nikos C. Kyrpides
Marcel Huntemann
James Han
Jörn Petersen
Natalia Ivanova
Anne Fiebig
Thomas Riedel
Victor Markowitz
Stefan Spring
Markus Göker
Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM)
Centre National de la Recherche Scientifique (CNRS)-EDF (EDF)-PIERRE FABRE-Université Pierre et Marie Curie - Paris 6 (UPMC)-Observatoire océanologique de Banyuls (OOB)
Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
Leibniz-Institut Deutsche Sammlung von Mikroorganismen und Zelllkulturen GmBH - DSMZ (GERMANY)
Department of Energy / Joint Genome Institute (DOE)
Los Alamos National Laboratory (LANL)
Lawrence Berkeley National Laboratory [Berkeley] (LBNL)
Observatoire océanologique de Banyuls (OOB)
Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-PIERRE FABRE-EDF (EDF)-Centre National de la Recherche Scientifique (CNRS)
Source :
Standards in Genomic Sciences, Standards in Genomic Sciences, 2014, 9 (3), pp.855-865. ⟨10.4056/sigs.5601028⟩, Web of Science
Publication Year :
2014
Publisher :
HAL CCSD, 2014.

Abstract

International audience; Wenxinia marina Ying et al. 2007 is the type species of the genus Wenxinia, a representative of the Roseobacter group within the alphaproteobacterial family Rhodobacteraceae, isolated from oilfield sediments of the South China Sea. This family was shown to harbor the most abundant bacteria especially from coastal and polar waters, but was also found in microbial mats, sediments and attached to different kind of surfaces. Here we describe the features of W. marina strain HY34 T together with the genome sequence and annotation of strain DSM 24838 T and novel aspects of its phenotype. The 4,181,754 bp containing genome sequence encodes 4,047 protein-coding genes and 59 RNA genes. The genome of W. marina DSM 24838 T was sequenced as part of the activities of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project funded by the DoE and the Transregional Collaborative Research Centre 51 (TRR51) funded by the German Research Foundation (DFG).

Details

Language :
English
Database :
OpenAIRE
Journal :
Standards in Genomic Sciences, Standards in Genomic Sciences, 2014, 9 (3), pp.855-865. ⟨10.4056/sigs.5601028⟩, Web of Science
Accession number :
edsair.doi.dedup.....c8e0dd7fed0d034fef8f105d600c5152
Full Text :
https://doi.org/10.4056/sigs.5601028⟩