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Membrane Binding and Self-Association of the Epsin N-Terminal Homology Domain
- Source :
- Journal of Molecular Biology
- Publisher :
- Elsevier Ltd.
-
Abstract
- Epsin possesses a conserved epsin N-terminal homology (ENTH) domain that acts as a phosphatidylinositol 4,5-bisphosphate‐lipid‐targeting and membrane‐curvature‐generating element. Upon binding phosphatidylinositol 4,5‐bisphosphate, the N-terminal helix (H0) of the ENTH domain becomes structured and aids in the aggregation of ENTH domains, which results in extensive membrane remodeling. In this article, atomistic and coarse-grained (CG) molecular dynamics (MD) simulations are used to investigate the structure and the stability of ENTH domain aggregates on lipid bilayers. EPR experiments are also reported for systems composed of different ENTH-bound membrane morphologies, including membrane vesicles as well as preformed membrane tubules. The EPR data are used to help develop a molecular model of ENTH domain aggregates on preformed lipid tubules that are then studied by CG MD simulation. The combined computational and experimental approach suggests that ENTH domains exist predominantly as monomers on vesiculated structures, while ENTH domains self-associate into dimeric structures and even higher‐order oligomers on the membrane tubes. The results emphasize that the arrangement of ENTH domain aggregates depends strongly on whether the local membrane curvature is isotropic or anisotropic. The molecular mechanism of ENTH‐domain-induced membrane vesiculation and tubulation and the implications of the epsin's role in clathrin-mediated endocytosis resulting from the interplay between ENTH domain membrane binding and ENTH domain self-association are also discussed.<br />Graphical Abstract Highlights ► ENTH domain plays an essential role in clathrin-mediated endocytosis. ► Membrane binding of ENTH domain is studied by a combined MD and EPR approach. ► A CG ENTH model for CG MD simulations is developed. ► ENTH-bound membrane tubules and vesicles are studied via CG MD simulations. ► The arrangement of ENTH domains highly correlates with local membrane curvature.
- Subjects :
- Models, Molecular
PIP2, phosphatidylinositol 4,5-bisphosphate
ENTH domain
Epsin
Molecular model
ENTH, epsin N-terminal homology
CME, clathrin-mediated endocytosis
Molecular Dynamics Simulation
Endocytosis
Article
03 medical and health sciences
Molecular dynamics
amphipathic helix binding
PMF, potential of mean force
0302 clinical medicine
Structural Biology
epsin
CG, coarse-grained
Lipid bilayer
Molecular Biology
030304 developmental biology
EM, electron microscopy
0303 health sciences
Chemistry
N-BAR, N-terminal Bin/Amphiphysin/Rvs-homology
Cell Membrane
Electron Spin Resonance Spectroscopy
MD, molecular dynamics
HAS, hybrid analytical systematic
molecular dynamics
Protein Structure, Tertiary
Cell biology
Adaptor Proteins, Vesicular Transport
Membrane
Membrane curvature
RT, room temperature
membrane remodeling
030217 neurology & neurosurgery
Protein Binding
Subjects
Details
- Language :
- English
- ISSN :
- 00222836
- Issue :
- 5
- Database :
- OpenAIRE
- Journal :
- Journal of Molecular Biology
- Accession number :
- edsair.doi.dedup.....ca000ccf9c04783dd2e293c8e347a1ca
- Full Text :
- https://doi.org/10.1016/j.jmb.2012.08.010