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A genome and gene catalog of glacier microbiomes

Authors :
Yongqin Liu
Mukan Ji
Tao Yu
Julian Zaugg
Alexandre M. Anesio
Zhihao Zhang
Songnian Hu
Philip Hugenholtz
Keshao Liu
Pengfei Liu
Yuying Chen
Yingfeng Luo
Tandong Yao
Source :
Liu, Y, Ji, M, Yu, T, Zaugg, J, Anesio, A M, Zhang, Z, Hu, S, Hugenholtz, P, Liu, K, Liu, P, Chen, Y, Luo, Y & Yao, T 2022, ' A genome and gene catalog of glacier microbiomes ', Nature Biotechnology, vol. 40, no. 9, pp. 1341-1348 . https://doi.org/10.1038/s41587-022-01367-2
Publication Year :
2022
Publisher :
Springer Science and Business Media LLC, 2022.

Abstract

Glaciers represent a unique inventory of microbial genetic diversity and a record of evolution. The Tibetan Plateau contains the largest area of low-latitude glaciers and is particularly vulnerable to global warming. By sequencing 85 metagenomes and 883 cultured isolates from 21 Tibetan glaciers covering snow, ice and cryoconite habitats, we present a specialized glacier microbial genome and gene catalog to archive glacial genomic and functional diversity. This comprehensive Tibetan Glacier Genome and Gene (TG2G) catalog includes 883 genomes and 2,358 metagenome-assembled genomes, which represent 968 candidate species spanning 30 phyla. The catalog also contains over 25 million non-redundant protein-encoding genes, the utility of which is demonstrated by the exploration of secondary metabolite biosynthetic potentials, virulence factor identification and global glacier metagenome comparison. The TG2G catalog is a valuable resource that enables enhanced understanding of the structure and functions of Tibetan glacial microbiomes.

Details

ISSN :
15461696 and 10870156
Volume :
40
Database :
OpenAIRE
Journal :
Nature Biotechnology
Accession number :
edsair.doi.dedup.....ca0cd667be0ea546834d34d939dec0fa
Full Text :
https://doi.org/10.1038/s41587-022-01367-2