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Development of highly validated SNP markers for genetic analyses of chestnut species
- Source :
- Conservation Genetics Resources, Conservation Genetics Resources, Springer, 2021, 13, pp.383-388. ⟨10.1007/s12686-021-01220-9⟩
- Publication Year :
- 2021
- Publisher :
- HAL CCSD, 2021.
-
Abstract
- International audience; To better study and manage chestnut trees and species, we identified nuclear single nucleotide polymorphism (SNP) markers using restriction-associated DNA sequencing. Out of 343 loci tested, 68 SNP markers were selected that withhold stringent quality criteria such as quasi-systematic amplification across species and Mendelian segregation in both purebred and hybrid individuals. They provide sufficient power for species, hybrids and backcross characterization as well as for clonal identification, as shown by a comparison with single sequenced repeat (SSR) loci.
- Subjects :
- 0106 biological sciences
0303 health sciences
MassARRAY
[SDV]Life Sciences [q-bio]
Fagaceae
01 natural sciences
Single nucleotide polymorphism
03 medical and health sciences
[SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breeding
Genetics
[SDV.BV]Life Sciences [q-bio]/Vegetal Biology
Castanea sp
Ecology, Evolution, Behavior and Systematics
030304 developmental biology
010606 plant biology & botany
Subjects
Details
- Language :
- English
- ISSN :
- 18777252 and 18777260
- Database :
- OpenAIRE
- Journal :
- Conservation Genetics Resources, Conservation Genetics Resources, Springer, 2021, 13, pp.383-388. ⟨10.1007/s12686-021-01220-9⟩
- Accession number :
- edsair.doi.dedup.....ca1aa6ce4803805cf95287a2458b89d0