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Minimum sample size for external validation of a clinical prediction model with a continuous outcome
- Publication Year :
- 2020
- Publisher :
- Wiley, 2020.
-
Abstract
- In prediction model research, external validation is needed to examine an existing model's performance using data independent to that for model development. Current external validation studies often suffer from small sample sizes and consequently imprecise predictive performance estimates. To address this, we propose how to determine the minimum sample size needed for a new external validation study of a prediction model for a binary outcome. Our calculations aim to precisely estimate calibration (Observed/Expected and calibration slope), discrimination (C-statistic), and clinical utility (net benefit). For each measure, we propose closed-form and iterative solutions for calculating the minimum sample size required. These require specifying: (i) target SEs (confidence interval widths) for each estimate of interest, (ii) the anticipated outcome event proportion in the validation population, (iii) the prediction model's anticipated (mis)calibration and variance of linear predictor values in the validation population, and (iv) potential risk thresholds for clinical decision-making. The calculations can also be used to inform whether the sample size of an existing (already collected) dataset is adequate for external validation. We illustrate our proposal for external validation of a prediction model for mechanical heart valve failure with an expected outcome event proportion of 0.018. Calculations suggest at least 9835 participants (177 events) are required to precisely estimate the calibration and discrimination measures, with this number driven by the calibration slope criterion, which we anticipate will often be the case. Also, 6443 participants (116 events) are required to precisely estimate net benefit at a risk threshold of 8%. Software code is provided.
- Subjects :
- Statistics and Probability
Epidemiology
Computer science
Calibration (statistics)
Population
Linear prediction
01 natural sciences
010104 statistics & probability
03 medical and health sciences
0302 clinical medicine
RA0421
Statistics
Humans
030212 general & internal medicine
0101 mathematics
education
Child
Event (probability theory)
education.field_of_study
Models, Statistical
Variance (accounting)
Prognosis
R1
Outcome (probability)
Confidence interval
Sample size determination
Sample Size
Calibration
RA
Subjects
Details
- Language :
- English
- ISSN :
- 10970258 and 02776715
- Database :
- OpenAIRE
- Accession number :
- edsair.doi.dedup.....cd13a32bd2c7fc347ace5e4e759cc62d