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Enhancing Research Through the Use of the Genotype-Tissue Expression (GTEx) Database

Authors :
Ansley Grimes Stanfill
Xueyuan Cao
Source :
Biological Research for Nursing
Publication Year :
2021
Publisher :
SAGE Publications, 2021.

Abstract

Despite a growing interest in multi-omic research, individual investigators may struggle to collect large-scale omic data, particularly from human subjects. Publicly available datasets can help to address this problem, including those sponsored by the NIH Common Fund, such as the Genotype-Tissue Expression (GTEx) database. This database contains genotype and expression data obtained from 54 non-diseased tissues in human subjects. But these data are often underutilized, because users may find the browsing tools to be counterintuitive or have difficulty navigating the procedures to request controlled data access. Furthermore, there is limited knowledge of these resources among nurse scientists interested in incorporating such information into their programs of research. This article outlines the procedures for using the GTEx database. Next, we provide one exemplar of using this resource to enhance existing research by investigating expression of dopamine receptor type 2 ( DRD2) across brain tissues in human subjects.

Details

ISSN :
15524175 and 10998004
Volume :
23
Database :
OpenAIRE
Journal :
Biological Research For Nursing
Accession number :
edsair.doi.dedup.....d1d06377e308cc6409e71c7e17953e01
Full Text :
https://doi.org/10.1177/1099800421994186