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Challenges in Real-Time Prediction of Infectious Disease: A Case Study of Dengue in Thailand
- Source :
- PLoS Neglected Tropical Diseases, Vol 10, Iss 6, p e0004761 (2016), PLoS Neglected Tropical Diseases
- Publication Year :
- 2016
- Publisher :
- Public Library of Science (PLoS), 2016.
-
Abstract
- Epidemics of communicable diseases place a huge burden on public health infrastructures across the world. Producing accurate and actionable forecasts of infectious disease incidence at short and long time scales will improve public health response to outbreaks. However, scientists and public health officials face many obstacles in trying to create such real-time forecasts of infectious disease incidence. Dengue is a mosquito-borne virus that annually infects over 400 million people worldwide. We developed a real-time forecasting model for dengue hemorrhagic fever in the 77 provinces of Thailand. We created a practical computational infrastructure that generated multi-step predictions of dengue incidence in Thai provinces every two weeks throughout 2014. These predictions show mixed performance across provinces, out-performing seasonal baseline models in over half of provinces at a 1.5 month horizon. Additionally, to assess the degree to which delays in case reporting make long-range prediction a challenging task, we compared the performance of our real-time predictions with predictions made with fully reported data. This paper provides valuable lessons for the implementation of real-time predictions in the context of public health decision making.<br />Author Summary Predicting the course of infectious disease outbreaks in real-time is a challenging task. It requires knowledge of the particular disease system as well as a pipeline that can turn raw data from a public health surveillance system into calibrated predictions of disease incidence. Dengue is a mosquito-borne infectious disease that places an immense public health and economic burden upon countries around the world, especially in tropical areas. In 2014 our research team, a collaboration of the Ministry of Public Health of Thailand and academic researchers from the United States, implemented a system for generating real-time forecasts of dengue hemorrhagic fever based on the disease surveillance reports from Thailand. We compared predictions from several different statistical models, identifying locations and times where our predictions were accurate. We also quantified the extent to which delayed reporting of cases in real-time impacted our predictions. Broadly speaking, improving real-time predictions can enable more targeted, timely interventions and risk communication, both of which have a measurable impact on disease spread in epidemic and pandemic scenarios. It is vital that we continue to build knowledge about the best ways to make these forecasts and integrate them into public health decision making.
- Subjects :
- 0301 basic medicine
Viral Diseases
Time Factors
Dengue hemorrhagic fever
Thai People
Epidemiology
Real time prediction
Dengue fever
Dengue Fever
Dengue
Geographical Locations
0302 clinical medicine
Mathematical and Statistical Techniques
Cognition
Medicine and Health Sciences
Ethnicities
Public and Occupational Health
030212 general & internal medicine
lcsh:Public aspects of medicine
Infectious Disease Epidemiology
Thailand
3. Good health
Infectious Diseases
Population Surveillance
Physical Sciences
Statistics (Mathematics)
Research Article
Neglected Tropical Diseases
medicine.medical_specialty
Asia
lcsh:Arctic medicine. Tropical medicine
Infectious Disease Control
lcsh:RC955-962
Decision Making
Disease Surveillance
Research and Analysis Methods
Models, Biological
03 medical and health sciences
Environmental health
medicine
Statistical Methods
Models, Statistical
business.industry
Public health
Public Health, Environmental and Occupational Health
Outbreak
Biology and Life Sciences
lcsh:RA1-1270
medicine.disease
Tropical Diseases
Virology
030104 developmental biology
13. Climate action
Infectious disease (medical specialty)
Infectious Disease Surveillance
People and Places
Cognitive Science
Population Groupings
business
Mathematics
Forecasting
Neuroscience
Subjects
Details
- Language :
- English
- ISSN :
- 19352735 and 19352727
- Volume :
- 10
- Issue :
- 6
- Database :
- OpenAIRE
- Journal :
- PLoS Neglected Tropical Diseases
- Accession number :
- edsair.doi.dedup.....d464248a6201f938a5514f19ff142029