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Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
- Source :
- Standards in Genomic Sciences, Standards in genomic sciences, vol 12, iss 1, Standards in Genomic Sciences, Vol 12, Iss 1, Pp 1-8 (2017)
- Publication Year :
- 2017
- Publisher :
- BioMed Central, 2017.
-
Abstract
- caballeronis is a plant-associated bacterium. Strain TNe-841T was isolated from the rhizosphere of tomato (Solanum lycopersicum L. var. lycopersicum) growing in Nepantla Mexico State. Initially this bacterium was found to effectively nodulate L. However, from an analysis of the genome of strain TNe-841T and from repeat inoculation experiments, we found that this strain did not nodulate bean and also lacked nodulation genes, suggesting that the genes were lost. The genome consists of 7,115,141 bp with a G + C content of 67.01%. The sequence includes 6251 protein-coding genes and 87 RNA genes.
- Subjects :
- 0301 basic medicine
lcsh:QH426-470
030106 microbiology
Genome
Short Genome Report
03 medical and health sciences
Nitrogen fixation
Botany
Genetics
Root nodulation
Gene
Rhizosphere
Strain (chemistry)
biology
Paraburkholderia caballeronis
Inoculation
fungi
food and beverages
biology.organism_classification
lcsh:Genetics
030104 developmental biology
Tomato plant
Biochemistry and Cell Biology
Solanum
Bacteria
Subjects
Details
- Language :
- English
- ISSN :
- 19443277
- Volume :
- 12
- Database :
- OpenAIRE
- Journal :
- Standards in Genomic Sciences
- Accession number :
- edsair.doi.dedup.....dc8fa4c95a497de4ea844fd231865983