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Identification of tumor-infiltrating immune cells and prognostic validation of tumor-infiltrating mast cells in adrenocortical carcinoma: results from bioinformatics and real-world data
- Source :
- OncoImmunology, Vol 9, Iss 1 (2020), Oncoimmunology, article-version (VoR) Version of Record
- Publication Year :
- 2020
- Publisher :
- Taylor & Francis Group, 2020.
-
Abstract
- Objective The purpose of this study was to explore the composition of tumor-infiltrating immune cells (TIIC) and prognostic significance of tumor-infiltrating mast cells (TIMC) in adrenocortical carcinoma (ACC). Methods The gene expression profiles of ACC were downloaded from the Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GSE90713, GSE12368). The abundance of TIICs in ACC samples was calculated by CIBERSORT algorithm and immunohistochemistry was used to identify mast cells of 39 tumor samples from Fudan University Shanghai Cancer Center (FUSCC). Differentially expressed genes (DEGs) were analyzed by LIMMA package using R software. Survival analysis was analyzed by Kaplan-Meier method and Cox regression models. Results The abundance of mast cells (p = .008) was positively correlated with ACC patients’ outcome in TCGA cohort and was also positively correlated with both overall survival (p
- Subjects :
- 0301 basic medicine
Male
China
differentially expressed genes
Chromosomal Proteins, Non-Histone
Immunology
Kinesins
Cell Cycle Proteins
Biology
03 medical and health sciences
0302 clinical medicine
Immune system
medicine
adrenocortical carcinoma
Immunology and Allergy
Adrenocortical carcinoma
Humans
Mast Cells
RC254-282
Original Research
cibersort
tumor infiltrating immune cells
Computational Biology
Neoplasms. Tumors. Oncology. Including cancer and carcinogens
RC581-607
medicine.disease
Prognosis
Adrenal Cortex Neoplasms
Gene Expression Regulation, Neoplastic
030104 developmental biology
Differentially expressed genes
Oncology
030220 oncology & carcinogenesis
Cancer research
Identification (biology)
Female
tumor infiltrating mast cells
Immunologic diseases. Allergy
Real world data
Research Article
Subjects
Details
- Language :
- English
- Volume :
- 9
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- OncoImmunology
- Accession number :
- edsair.doi.dedup.....df412de05aa4aeeffab6019dd42ef779