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pH‐Dependent Absorption Spectrum of Oxyluciferin Analogues in the Presence of Adenosine Monophosphate
- Source :
- ChemPhotoChem, ChemPhotoChem, ChemPubSoc Europe, 2019, ⟨10.1002/cptc.201900150⟩, ChemPhotoChem, Wiley, 2019, ⟨10.1002/cptc.201900150⟩, ChemPhotoChem, 2019, ⟨10.1002/cptc.201900150⟩
- Publication Year :
- 2019
- Publisher :
- HAL CCSD, 2019.
-
Abstract
- International audience; The photophysical properties of oxyluciferin, the light emitter responsible for firefly bioluminescence, are pH-dependent. One of the potential proton accep-tor/donor is adenosine monophosphate (AMP). We have studied three oxylu-ciferin synthetic analogues with or without AMP, in water, in the pH=5 to 11 range, using both experimental steady-state absorption spectroscopy or the recently developed computational protocol that uses constant pH molecular dynamics and then hybrid QM/MM calculations (CpHMD-then-QM/MM). The latter features a systematic investigation of all the protonation microstates using molecular dynamics simulations coupled to thousands hybrid QM/MM vertical excitation energies. Our results demonstrate that AMP does not significantly modify the visible light absorption of the analogues, whatever the pH value. We also show that CpHMD-then-QM/MM is capable to qualitatively reproduce the pH-dependent absorption spectrum of the analogues, despite the employed low QM level of theory.
- Subjects :
- Adenosine monophosphate
absorption spectroscopy
010304 chemical physics
Proton
Absorption spectroscopy
computational photochemistry
Chemistry
Organic Chemistry
pH dependency
Protonation
010402 general chemistry
Photochemistry
oxyluciferin
01 natural sciences
0104 chemical sciences
Analytical Chemistry
[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry
Molecular dynamics
chemistry.chemical_compound
multiscale simulations
0103 physical sciences
Physical and Theoretical Chemistry
Absorption (electromagnetic radiation)
Excitation
Visible spectrum
Subjects
Details
- Language :
- English
- ISSN :
- 23670932
- Database :
- OpenAIRE
- Journal :
- ChemPhotoChem, ChemPhotoChem, ChemPubSoc Europe, 2019, ⟨10.1002/cptc.201900150⟩, ChemPhotoChem, Wiley, 2019, ⟨10.1002/cptc.201900150⟩, ChemPhotoChem, 2019, ⟨10.1002/cptc.201900150⟩
- Accession number :
- edsair.doi.dedup.....e049094b690740bdca73eeeb365b2754
- Full Text :
- https://doi.org/10.1002/cptc.201900150⟩