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Rare Variants in the ADAMTS13 Von Willebrand Factor–Binding Domain Contribute to Pediatric Stroke
- Source :
- Circulation: Cardiovascular Genetics. 9:357-367
- Publication Year :
- 2016
- Publisher :
- Ovid Technologies (Wolters Kluwer Health), 2016.
-
Abstract
- Background— Recently, we reported a gene network of ADAMTS (A Disintegrin-like and Metalloprotease with Thrombospondin motifs) genes as central component of the genetic risk contributing to pediatric stroke. ADAMTS13 is a prime example for such a key component as it cleaves von Willebrand factor multimers, reduces platelet adhesion and aggregation, and downregulates thrombus formation and inflammation. Methods and Results— We characterized the genetic architecture of ADAMTS13 through targeted next-generation sequencing of 48 affected children and their unaffected siblings and identified in total 241 variants (single nucleotide polymorphisms or insertions/deletions) in the ADAMTS13 gene. From these, based on significance in the sibship disequilibrium test ( P ADAMTS13 gene for genotyping in 270 trios and subsequent association analyses. Transmission disequilibrium testing was performed for affection status and ADAMTS13 activity levels using PLINK and FBAT, respectively. Ten single nucleotide polymorphisms were significantly associated with pediatric stroke ( P P P =0.0004 and P =0.0092). The resulting protective haplotype H1.1. (T:U 95.5: 144.4; P =0.0016) is associated with increased ADAMTS13 levels (age-adjusted P =0.0108). Haplotype association using a sliding window approach assigns this association to the ADAMTS13 von Willebrand factor–binding domain ( P =1.2×10 −4 ). Conclusions— Our data provide a link between the genetic architecture of ADAMTS13 , ADAMTS13 levels, and stroke susceptibility. Altogether, these studies render ADAMTS13 an attractive candidate for functional studies and may contribute to personalized diagnosis and treatment options in future.
- Subjects :
- Adult
Male
0301 basic medicine
DNA Mutational Analysis
ADAMTS13 Protein
Single-nucleotide polymorphism
030204 cardiovascular system & hematology
Bioinformatics
Polymorphism, Single Nucleotide
Linkage Disequilibrium
03 medical and health sciences
0302 clinical medicine
INDEL Mutation
Von Willebrand factor
Predictive Value of Tests
Risk Factors
hemic and lymphatic diseases
von Willebrand Factor
Genetic variation
Genetics
medicine
Humans
Pediatric stroke
Genetic Predisposition to Disease
Protein Interaction Domains and Motifs
Age of Onset
Child
Genotyping
Genetics (clinical)
biology
ADAMTS
Haplotype
Infant, Newborn
High-Throughput Nucleotide Sequencing
Infant
Reproducibility of Results
medicine.disease
ADAMTS13
Stroke
Phenotype
030104 developmental biology
Haplotypes
Case-Control Studies
Child, Preschool
biology.protein
Female
Cardiology and Cardiovascular Medicine
Protein Binding
Subjects
Details
- ISSN :
- 19423268 and 1942325X
- Volume :
- 9
- Database :
- OpenAIRE
- Journal :
- Circulation: Cardiovascular Genetics
- Accession number :
- edsair.doi.dedup.....e1245002f3fea3211e1590702452578a
- Full Text :
- https://doi.org/10.1161/circgenetics.115.001184