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Deep learning fully convolution network for lumen characterization in diabetic patients using carotid ultrasound: a tool for stroke risk
- Source :
- Medical & Biological Engineering & Computing. 57:543-564
- Publication Year :
- 2018
- Publisher :
- Springer Science and Business Media LLC, 2018.
-
Abstract
- Manual ultrasound (US)-based methods are adapted for lumen diameter (LD) measurement to estimate the risk of stroke but they are tedious, error prone, and subjective causing variability. We propose an automated deep learning (DL)-based system for lumen detection. The system consists of a combination of two DL systems: encoder and decoder for lumen segmentation. The encoder employs a 13-layer convolution neural network model (CNN) for rich feature extraction. The decoder employs three up-sample layers of fully convolution network (FCN) for lumen segmentation. Three sets of manual tracings were used during the training paradigm leading to the design of three DL systems. Cross-validation protocol was implemented for all three DL systems. Using the polyline distance metric, the precision of merit for three DL systems over 407 US scans was 99.61%, 97.75%, and 99.89%, respectively. The Jaccard index and Dice similarity of DL lumen segmented region against three ground truth (GT) regions were 0.94, 0.94, and 0.93 and 0.97, 0.97, and 0.97, respectively. The corresponding AUC for three DL systems was 0.95, 0.91, and 0.93. The experimental results demonstrated superior performance of proposed deep learning system over conventional methods in literature. Graphical abstract ᅟ.
- Subjects :
- Male
Jaccard index
Computer science
0206 medical engineering
Feature extraction
Biomedical Engineering
02 engineering and technology
Risk Assessment
Convolutional neural network
030218 nuclear medicine & medical imaging
Machine Learning
03 medical and health sciences
Deep Learning
0302 clinical medicine
Diabetes Mellitus
Humans
Aged
Retrospective Studies
Ultrasonography
Ground truth
business.industry
Deep learning
Pattern recognition
020601 biomedical engineering
Computer Science Applications
Stroke
Lumen Diameter
Carotid Arteries
Female
Neural Networks, Computer
Artificial intelligence
business
Encoder
Lumen (unit)
Subjects
Details
- ISSN :
- 17410444 and 01400118
- Volume :
- 57
- Database :
- OpenAIRE
- Journal :
- Medical & Biological Engineering & Computing
- Accession number :
- edsair.doi.dedup.....e536da2412ad79e8f125bf042a400d03
- Full Text :
- https://doi.org/10.1007/s11517-018-1897-x