Back to Search Start Over

Diverse Genetic Landscape of Suspected Retinitis Pigmentosa in a Large Korean Cohort

Authors :
Beom Hee Lee
Young-Hee Yoon
Go-Hun Seo
Eul-Ju Seo
Joo Yong Lee
You-Na Kim
Changwon Keum
Yoon Jeon Kim
Source :
Genes, Volume 12, Issue 5, Genes, Vol 12, Iss 675, p 675 (2021)
Publication Year :
2021
Publisher :
Multidisciplinary Digital Publishing Institute, 2021.

Abstract

We conducted targeted next-generation sequencing (TGS) and/or whole exome sequencing (WES) to assess the genetic profiles of clinically suspected retinitis pigmentosa (RP) in the Korean population. A cohort of 279 unrelated Korean patients with clinically diagnosed RP and available family members underwent molecular analyses using TGS consisting of 88 RP-causing genes and/or WES with clinical variant interpretation. The combined genetic tests (TGS and/or WES) found a mutation in the 44 RP-causing genes and seven inherited retinal disease (IRD)-causing genes, and the total mutation detection rate was 57%. The mutation detection rate was higher in patients who experienced visual deterioration at a younger age (75.4%, age of symptom onset under 10 years) and who had a family history of RP (70.7%). The most common causative genes were EYS (8.2%), USH2A (6.8%), and PDE6B (4.7%), but mutations were dispersed among the 51 RP/IRD genes generally. Meanwhile, the PDE6B mutation was the most common in patients experiencing initial symptoms in their first decade, EYS in their second to third decades, and USH2A in their fifth decades and older. Of note, WES revealed some unexpected genotypes: ABCC6, CHM, CYP4V2, RS1, TGFBI, VPS13B, and WDR19, which were verified by ophthalmological re-phenotyping.

Details

Language :
English
ISSN :
20734425
Database :
OpenAIRE
Journal :
Genes
Accession number :
edsair.doi.dedup.....e654d6ee6e02cb0692ff245b14f05a6a
Full Text :
https://doi.org/10.3390/genes12050675