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The venom of the snake genus Atheris contains a new class of peptides with clusters of histidine and glycine residues
- Source :
- Rapid Communications in Mass Spectrometry, Rapid Communications in Mass Spectrometry, 2007, 21 (3), pp.406-12. ⟨10.1002/rcm.2853⟩
- Publication Year :
- 2007
-
Abstract
- We investigated venoms from members of the genus Atheris (Serpentes, Viperidae), namely the rough scale bush viper (Atheris squamigera), the green bush viper (A. chlorechis) and the great lakes bush viper (A. nitschei), using mass spectrometry-based strategies, relying on matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry (MALDI-TOF-MS) and electrospray ionisation tandem mass spectrometry (ESI-MS/MS) with de novo peptide sequencing. We discovered a set of novel peptides with masses in the 2-3 kDa range and containing poly-His and poly-Gly segments (pHpG). Complete primary structural elucidation and confirmation of two sequences by Edman degradation indicated the consensus sequence EDDH(9)GVG(10). Bioinformatic investigations in protein sequence databanks did not show relevant homology with known peptides or proteins. However, a more extensive investigation of data in nucleic acid databases revealed some similarities to the precursor sequences of bradykinin potentiating peptides (BPP) and C-type natriuretic peptides (CNP), agents that are known to affect the cardiovascular system by acting on specific metalloproteases and receptors. The novel pHpG peptides found in Atheris venoms might also act on the cardiovascular system by inhibiting particular metalloproteases, which however remain to be identified.
- Subjects :
- Spectrometry, Mass, Electrospray Ionization
Atheris
MESH: Sequence Analysis, Protein
Molecular Sequence Data
MESH: Viperidae
Glycine
Venom
MESH: Amino Acid Sequence
Viper Venoms
Tandem mass spectrometry
MESH: Peptide Mapping
MESH: Spectrometry, Mass, Electrospray Ionization
Peptide Mapping
Analytical Chemistry
MESH: Histidine
Protein sequencing
Viperidae
Sequence Analysis, Protein
biology.animal
Consensus sequence
Animals
MESH: Animals
[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology
Histidine
Amino Acid Sequence
Spectroscopy
MESH: Molecular Sequence Data
biology
Edman degradation
MESH: Peptides
Chemistry
Organic Chemistry
De novo peptide sequencing
biology.organism_classification
MESH: Glycine
MESH: Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Biochemistry
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
MESH: Viper Venoms
Peptides
Subjects
Details
- ISSN :
- 09514198 and 10970231
- Volume :
- 21
- Issue :
- 3
- Database :
- OpenAIRE
- Journal :
- Rapid communications in mass spectrometry : RCM
- Accession number :
- edsair.doi.dedup.....e77e759a6ddb36cb0bf2a83fb9f80519
- Full Text :
- https://doi.org/10.1002/rcm.2853⟩