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Validation of a clinical practice-based algorithm for the diagnosis of autosomal recessive cerebellar ataxias based on NGS identified cases
- Source :
- Journal of Neurology, Journal of Neurology, Springer Verlag, 2016, 263 (7), pp.1314-1322. 〈http://link.springer.com/article/10.1007%2Fs00415-016-8112-5〉. 〈10.1007/s00415-016-8112-5〉, Journal of Neurology, Springer Verlag, 2016, 263 (7), pp.1314-1322. ⟨10.1007/s00415-016-8112-5⟩, Journal of Neurology, 2016, 263 (7), pp.1314-1322. ⟨10.1007/s00415-016-8112-5⟩
- Publication Year :
- 2016
- Publisher :
- HAL CCSD, 2016.
-
Abstract
- International audience; Establishing a molecular diagnosis of autosomal recessive cerebellar ataxias (ARCA) is challenging due to phenotype and genotype heterogeneity. We report the validation of a previously published clinical practice-based algorithm to diagnose ARCA. Two assessors performed a blind analysis to determine the most probable mutated gene based on comprehensive clinical and paraclinical data, without knowing the molecular diagnosis of 23 patients diagnosed by targeted capture of 57 ataxia genes and high-throughput sequencing coming from a 145 patients series. The correct gene was predicted in 61 and 78 % of the cases by the two assessors, respectively. There was a high inter-rater agreement [K = 0.85 (0.55-0.98) p < 0.001] confirming the algorithm's reproducibility. Phenotyping patients with proper clinical examination, imaging, biochemical investigations and nerve conduction studies remain crucial for the guidance of molecular analysis and to interpret next generation sequencing results. The proposed algorithm should be helpful for diagnosing ARCA in clinical practice.
- Subjects :
- Male
0301 basic medicine
Neurology
Bioinformatics
form
0302 clinical medicine
Databases, Genetic
Recessive ataxia
Age of Onset
Neurogenetics
Neuroradiology
medicine.diagnostic_test
High-Throughput Nucleotide Sequencing
deficiency
cohort
Middle Aged
adck3
3. Good health
Female
medicine.symptom
Algorithm
Algorithms
Adult
medicine.medical_specialty
Ataxia
Adolescent
Cerebellar Ataxia
Genes, Recessive
Physical examination
[SDV.BC]Life Sciences [q-bio]/Cellular Biology
cabc1/adck3
Young Adult
03 medical and health sciences
atrophy
Next generation sequencing
medicine
Humans
gene
Aged
Retrospective Studies
Cerebellar ataxia
business.industry
Electromyography
[ SDV.BC ] Life Sciences [q-bio]/Cellular Biology
Reproducibility of Results
mutations
030104 developmental biology
phenotypic variability
Neurology (clinical)
Age of onset
business
030217 neurology & neurosurgery
ADCK3
Subjects
Details
- Language :
- English
- ISSN :
- 03405354 and 14321459
- Database :
- OpenAIRE
- Journal :
- Journal of Neurology, Journal of Neurology, Springer Verlag, 2016, 263 (7), pp.1314-1322. 〈http://link.springer.com/article/10.1007%2Fs00415-016-8112-5〉. 〈10.1007/s00415-016-8112-5〉, Journal of Neurology, Springer Verlag, 2016, 263 (7), pp.1314-1322. ⟨10.1007/s00415-016-8112-5⟩, Journal of Neurology, 2016, 263 (7), pp.1314-1322. ⟨10.1007/s00415-016-8112-5⟩
- Accession number :
- edsair.doi.dedup.....efb29e36def2c2c26f96136dcb304806
- Full Text :
- https://doi.org/10.1007/s00415-016-8112-5〉