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Vallitalea guaymasensis gen. nov., sp nov., isolated from marine sediment
- Source :
- International Journal of Systematic and Evolutionary Microbiology, International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2013, 63 (Pt 8), pp.3019-23. 〈10.1099/ijs.0.045708-0〉, International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2013, 63 (Pt 8), pp.3019-23. ⟨10.1099/ijs.0.045708-0⟩, International Journal of Systematic and Evolutionary Microbiology, 2013, 63 (Pt 8), pp.3019-23. ⟨10.1099/ijs.0.045708-0⟩, International Journal Of Systematic And Evolutionary Microbiology (1466-5026) (Soc General Microbiology), 2013-08, Vol. 63, P. 3019-3023
- Publication Year :
- 2013
-
Abstract
- A novel obligately anaerobic, non-spore-forming, rod-shaped mesophilic, halophilic, Gram-stain-negative bacterium, was isolated from sediments of Guaymas Basin. The strain, designated Ra1766G1T, grew at 20–40 °C (optimum, 30–35 °C) and at pH 6.0–8.0 (optimum, pH 6.5–7.5). It required 0.5–7.5 % NaCl (optimum, 2–3 %) for growth. Sulfate, thiosulfate, elemental sulfur, sulfite, fumarate, nitrate and nitrite were not used as terminal electron acceptors. Strain Ra1766G1T used cellobiose, glucose, mannose, maltose, arabinose, raffinose, galactose, ribose, sucrose, pyruvate and xylose as electron donors. The main fermentation product from glucose metabolism was acetate. The predominant cellular fatty acids were anteiso-C15 : 0, iso-C15 : 0, anteiso DMA-C15 : 0 and C16 : 0. The main polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, iso-DMA-C15 : 0 glycolipids and phospholipids. The G+C content of the genomic DNA was 31.2 mol%. The closest phylogenetic relatives of strain Ra1766G1T were Natranaerovirga pectinivora AP3T (92.4 % 16S rRNA gene sequence similarity), Natranaerovirga hydrolytica APP2T(90.2 %) and Defluviitalea saccharophila 6LT2T (88.9 %). On the basis of phylogenetic inference and phenotypic properties, strain Ra1766G1T represents a novel species of a new genus for which the name Vallitalea guaymasensis is proposed. The type strain of the type species is Ra1766G1T ( = DSM 24848T = JCM17997T).
- Subjects :
- Arabinose
Geologic Sediments
MESH: Sequence Analysis, DNA
MESH : Molecular Sequence Data
[SDV]Life Sciences [q-bio]
DIVERSITY
Cellobiose
Xylose
chemistry.chemical_compound
RNA, Ribosomal, 16S
WATER
MESH : DNA, Bacterial
Raffinose
MESH: Phylogeny
PHYLOGENIES
MESH : Fatty Acids
Phospholipids
Phylogeny
MESH: Bacteria, Anaerobic
Base Composition
0303 health sciences
Strain (chemistry)
Fatty Acids
General Medicine
6. Clean water
Bacterial Typing Techniques
MESH: Fatty Acids
MESH: RNA, Ribosomal, 16S
ALIGNMENT
THERMOPHILIC BACTERIUM
Biochemistry
SULFATE-REDUCING BACTERIA
FATTY-ACIDS
DNA, Bacterial
Molecular Sequence Data
MESH : Pacific Ocean
Biology
Microbiology
MESH : Geologic Sediments
MESH: Bacterial Typing Techniques
MESH : Phospholipids
MESH : Base Composition
Bacteria, Anaerobic
03 medical and health sciences
MESH: Base Composition
MESH : Bacteria, Anaerobic
DEOXYRIBONUCLEIC-ACID
MESH: Pacific Ocean
Ecology, Evolution, Behavior and Systematics
030304 developmental biology
BASIN
MESH: Phospholipids
Pacific Ocean
MESH: Molecular Sequence Data
[ SDV ] Life Sciences [q-bio]
030306 microbiology
MESH : Phylogeny
Sequence Analysis, DNA
Maltose
MESH: Geologic Sediments
MESH: DNA, Bacterial
MESH : RNA, Ribosomal, 16S
chemistry
Galactose
Fermentation
MESH : Bacterial Typing Techniques
MESH : Sequence Analysis, DNA
Subjects
Details
- ISSN :
- 14665026 and 14665034
- Database :
- OpenAIRE
- Journal :
- International Journal of Systematic and Evolutionary Microbiology, International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2013, 63 (Pt 8), pp.3019-23. 〈10.1099/ijs.0.045708-0〉, International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2013, 63 (Pt 8), pp.3019-23. ⟨10.1099/ijs.0.045708-0⟩, International Journal of Systematic and Evolutionary Microbiology, 2013, 63 (Pt 8), pp.3019-23. ⟨10.1099/ijs.0.045708-0⟩, International Journal Of Systematic And Evolutionary Microbiology (1466-5026) (Soc General Microbiology), 2013-08, Vol. 63, P. 3019-3023
- Accession number :
- edsair.doi.dedup.....f22aa5eab46a799687cffd7aac86bfec
- Full Text :
- https://doi.org/10.1099/ijs.0.045708-0〉