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Convexity in Tree Spaces

Authors :
Bo Lin
Bernd Sturmfels
Ruriko Yoshida
Xiaoxian Tang
Operations Research (OR)
Source :
SIAM Journal on Discrete Mathematics. 31:2015-2038
Publication Year :
2017
Publisher :
Society for Industrial & Applied Mathematics (SIAM), 2017.

Abstract

We study the geometry of metrics and convexity structures on the space of phylogenetic trees, which is here realized as the tropical linear space of all \ ultrametrics. The ${\rm CAT}(0)$-metric of Billera-Holmes-Vogtman arises from the theory of orthant spaces. While its geodesics can be computed by the Owen-Provan algorithm, geodesic triangles are complicated. We show that the dimension of such a triangle can be arbitrarily high. Tropical convexity and the tropical metric behave better. They exhibit properties desirable for geometric statistics, such as geodesics of small depth.<br />Comment: 21 pages, 5 figures; Theorem 13 is now proved in all dimensions

Details

ISSN :
10957146 and 08954801
Volume :
31
Database :
OpenAIRE
Journal :
SIAM Journal on Discrete Mathematics
Accession number :
edsair.doi.dedup.....f2645d35772bbea03d63952a07f602f2