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Giant virus-related sequences in the 5300-year-old Ötzi mummy metagenome

Authors :
Bariaa Nafeh
Gabriel Augusto Pires de Souza
Clara Rolland
Philippe Colson
Bernard La Scola
Microbes évolution phylogénie et infections (MEPHI)
Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)
Institut Hospitalier Universitaire Méditerranée Infection (IHU Marseille)
Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)
Source :
Virus Genes, Virus Genes, Springer Verlag, 2021, 57 (2), pp.222-227. ⟨10.1007/s11262-021-01823-2⟩, Virus Genes, 2021, 57 (2), pp.222-227. ⟨10.1007/s11262-021-01823-2⟩
Publication Year :
2021
Publisher :
Springer Science and Business Media LLC, 2021.

Abstract

Giant viruses have brought new perspectives on the virosphere. They have been increasingly described in humans, including in several metagenomic studies. Here, we searched into the metagenome of the 5300-year-old Otzi mummy for the presence of giant virus-related sequences using MG-Digger pipeline. We found 19 reads (0.00006% of the total read number) that best matched (mean ± standard deviation (range) for e-values of 5.0E-6 ± 1.4E-6 (6.0E-5–4.0E-10) and for amino acid identity of 69.9 ± 8.7% (46.4–84.9%) and most significantly with sequences from various giant viruses, including mostly mimiviruses. This expands current knowledge on the ubiquity and relationship with humans of giant viruses.

Details

ISSN :
1572994X and 09208569
Volume :
57
Database :
OpenAIRE
Journal :
Virus Genes
Accession number :
edsair.doi.dedup.....f2ee6f874500ed76707236fbbf32775b
Full Text :
https://doi.org/10.1007/s11262-021-01823-2