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Identification and validation of a prognostic signature and combination drug therapy for immunotherapy of head and neck squamous cell carcinoma
- Source :
- Computational and Structural Biotechnology Journal, Computational and Structural Biotechnology Journal, Vol 19, Iss, Pp 1263-1276 (2021)
- Publication Year :
- 2021
- Publisher :
- Elsevier BV, 2021.
-
Abstract
- Graphical abstract<br />Immunotherapy has become a promising therapeutic option for Head and neck squamous cell carcinoma (HNSC). However, only a small percentage of patients could benefit from it, and the overall prognosis was far from satisfactory. In this study, by comprehensively computational analyses of hundreds of HNSC samples, a prognostic signature composed of 13 immune-related genes (IRGs) was constructed. The results of the analyses in multiple datasets indicated that our signature had high predictive accuracy and could serve as an independent prognostic predictor. Based on this signature and multiple clinical variables, we also established a prognostic nomogram to quantitatively predict the survival risk of individual patients. Moreover, this signature could accurately predict survival, reflect the immune microenvironment, and predict immunotherapy efficacy among HNSC patients. Two potential drugs (doxorubicin and daunorubicin) were also identified via Connectivity Map and molecular docking, which could be used for HNSC combination therapy. Taken together, we developed and validated a robust IRG-based prognostic signature to monitor the prognosis of HNSC, which could provide a solid foundation for individualized cancer immunotherapy.
- Subjects :
- Oncology
medicine.medical_specialty
Combination therapy
Bioinformatics
medicine.medical_treatment
Biophysics
Cancer immunotherapy
Biochemistry
03 medical and health sciences
0302 clinical medicine
Structural Biology
Internal medicine
Genetics
medicine
Doxorubicin
IRGs
ComputingMethodologies_COMPUTERGRAPHICS
030304 developmental biology
0303 health sciences
Prognostic signature
business.industry
Head and neck squamous cell carcinoma
Immunotherapy
Nomogram
medicine.disease
Head and neck squamous-cell carcinoma
Computer Science Applications
030220 oncology & carcinogenesis
Molecular docking
business
TP248.13-248.65
Research Article
Biotechnology
medicine.drug
Subjects
Details
- ISSN :
- 20010370
- Volume :
- 19
- Database :
- OpenAIRE
- Journal :
- Computational and Structural Biotechnology Journal
- Accession number :
- edsair.doi.dedup.....f3d45f11a8146fdea4b0e9f40570458a
- Full Text :
- https://doi.org/10.1016/j.csbj.2021.01.046