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Vertebrate SLRP family evolution and the subfunctionalization of osteoglycin gene duplicates in teleost fish
- Source :
- Recercat. Dipósit de la Recerca de Catalunya, instname, BMC Evolutionary Biology, Repositório Científico de Acesso Aberto de Portugal, Repositório Científico de Acesso Aberto de Portugal (RCAAP), instacron:RCAAP, BMC Evolutionary Biology, Vol 18, Iss 1, Pp 1-17 (2018), Dipòsit Digital de la UB, Universidad de Barcelona
- Publisher :
- BioMed Central
-
Abstract
- Background Osteoglycin (OGN, a.k.a. mimecan) belongs to cluster III of the small leucine-rich proteoglycans (SLRP) of the extracellular matrix (ECM). In vertebrates OGN is a characteristic ECM protein of bone. In the present study we explore the evolution of SLRP III and OGN in teleosts that have a skeleton adapted to an aquatic environment. Results The SLRP gene family has been conserved since the separation of chondrichthyes and osteichthyes. Few gene duplicates of the SLRP III family exist even in the teleosts that experienced a specific whole genome duplication. One exception is ogn for which duplicate copies were identified in fish genomes. The ogn promoter sequence and in vitro mesenchymal stem cell (MSC) cultures suggest the duplicate ogn genes acquired divergent functions. In gilthead sea bream (Sparus aurata) ogn1 was up-regulated during osteoblast and myocyte differentiation in vitro, while ogn2 was severely down-regulated during bone-derived MSCs differentiation into adipocytes in vitro. Conclusions Overall, the phylogenetic analysis indicates that the SLRP III family in vertebrates has been under conservative evolutionary pressure. The retention of the ogn gene duplicates in teleosts was linked with the acquisition of different functions. The acquisition by OGN of functions other than that of a bone ECM protein occurred early in the vertebrate lineage. National funds through FCT – Foundation for Science and Technology (UID/ Multi/04326/2016). info:eu-repo/semantics/publishedVersion
- Subjects :
- 0301 basic medicine
Lineage (genetic)
Evolution
Genetic Linkage
Biology
Genome
Synteny
Monocytes
Teleosts
Extracellular matrix
Evolution, Molecular
03 medical and health sciences
0302 clinical medicine
Genes, Duplicate
biology.animal
Small leucine-rich proteoglycan (SLRP) family
QH359-425
Adipocytes
Gene family
Animals
Promoter Regions, Genetic
Gene
Ecology, Evolution, Behavior and Systematics
Cells, Cultured
Conserved Sequence
Phylogeny
Glycoproteins
Small Leucine-Rich Proteoglycans
Myocytes
Osteoblasts
Osteoglycin
Gene Expression Profiling
Fishes
Vertebrate
Cell Differentiation
Mesenchymal Stem Cells
Evolutionary pressure
Peixos
Sea Bream
030104 developmental biology
Evolutionary biology
Multigene Family
Subfunctionalization
Intercellular Signaling Peptides and Proteins
Sequence Alignment
030217 neurology & neurosurgery
Research Article
Glicoproteïnes
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- Recercat. Dipósit de la Recerca de Catalunya, instname, BMC Evolutionary Biology, Repositório Científico de Acesso Aberto de Portugal, Repositório Científico de Acesso Aberto de Portugal (RCAAP), instacron:RCAAP, BMC Evolutionary Biology, Vol 18, Iss 1, Pp 1-17 (2018), Dipòsit Digital de la UB, Universidad de Barcelona
- Accession number :
- edsair.doi.dedup.....f588b105206ce957b84e580a23090833