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Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources

Authors :
Alicia Clum
T. B. K. Reddy
Ivan Arroyo-Herrera
David Sánchez-López
Natalia Ivanova
Ethan A. Humm
Dimitrios Stamatis
Erika Yanet Tapia-García
Paulina Estrada-de los Santos
Nicole Shapiro
Maskit Maymon
Manoj Pillay
Ann M. Hirsch
J. Antonio Ibarra
Fernando Uriel Rojas-Rojas
Natalia Mikhailova
Nikos C. Kyrpides
Krishnaveni Palaniappan
Neha Varghese
Marcel Huntemann
Tanja Woyke
Source :
Rojas-Rojas, Fernando Uriel; Sánchez-López, David; Tapia-García, Erika Yanet; Arroyo-Herrera, Ivan; Maymon, Maskit; Humm, Ethan; et al.(2019). Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources.. Current microbiology. doi: 10.1007/s00284-019-01657-0. UCLA: Retrieved from: http://www.escholarship.org/uc/item/00t1012p, Current microbiology, vol 76, iss 5
Publication Year :
2019
Publisher :
eScholarship, University of California, 2019.

Abstract

Burkholderia cenocepacia TAtl-371 was isolated from the rhizosphere of a tomato plant growing in Atlatlahucan, Morelos, Mexico. This strain exhibited a broad antimicrobial spectrum against bacteria, yeast, and fungi. Here, we report and describe the improved, high-quality permanent draft genome of B. cenocepacia TAtl-371, which was sequenced using a combination of PacBio RS and PacBio RS II sequencing methods. The 7,496,106bp genome of the TAtl-371 strain is arranged in three scaffolds, contains 6722 protein-coding genes, and 99 RNA only-encoding genes. Genome analysis revealed genes related to biosynthesis of antimicrobials such as non-ribosomal peptides, siderophores, chitinases, and bacteriocins. Moreover, analysis of bacterial growth on different carbon and nitrogen sources shows that the strain retains its antimicrobial ability.

Details

Language :
English
Database :
OpenAIRE
Journal :
Rojas-Rojas, Fernando Uriel; Sánchez-López, David; Tapia-García, Erika Yanet; Arroyo-Herrera, Ivan; Maymon, Maskit; Humm, Ethan; et al.(2019). Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources.. Current microbiology. doi: 10.1007/s00284-019-01657-0. UCLA: Retrieved from: http://www.escholarship.org/uc/item/00t1012p, Current microbiology, vol 76, iss 5
Accession number :
edsair.doi.dedup.....f6339e1ca0b8c551fe3a28600d64dfe9
Full Text :
https://doi.org/10.1007/s00284-019-01657-0.