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Chemical event chain model of coupled genetic oscillators
- Source :
- CONICET Digital (CONICET), Consejo Nacional de Investigaciones Científicas y Técnicas, instacron:CONICET, Physical Review E
- Publication Year :
- 2018
- Publisher :
- arXiv, 2018.
-
Abstract
- We introduce a stochastic model of coupled genetic oscillators in which chains of chemical events involved in gene regulation and expression are represented as sequences of Poisson processes. We characterize steady states by their frequency, their quality factor and their synchrony by the oscillator cross correlation. The steady state is determined by coupling and exhibits stochastic transitions between different modes. The interplay of stochasticity and nonlinearity leads to isolated regions in parameter space in which the coupled system works best as a biological pacemaker. Key features of the stochastic oscillations can be captured by an effective model for phase oscillators that are coupled by signals with distributed delays.<br />Comment: 12 pages, 8 figures
- Subjects :
- 0301 basic medicine
Steady state (electronics)
COUPLED OSCILLATORS
Stochastic modelling
Ciencias Físicas
Cells
Phase (waves)
FOS: Physical sciences
Parameter space
Otras Ciencias Físicas
Models, Biological
Ciencias Biológicas
purl.org/becyt/ford/1 [https]
03 medical and health sciences
STOCHASTIC DYNAMICAL SYSTEMS
Cell Behavior (q-bio.CB)
Physics - Biological Physics
Statistical physics
purl.org/becyt/ford/1.6 [https]
Physics
Structure formation and active systems
Stochastic Processes
Cross-correlation
Stochastic process
Biología del Desarrollo
purl.org/becyt/ford/1.3 [https]
Nonlinear Sciences - Adaptation and Self-Organizing Systems
PHASE OSCILLATOR MODELS
Coupling (physics)
Nonlinear system
030104 developmental biology
Gene Expression Regulation
Biological Physics (physics.bio-ph)
FOS: Biological sciences
SYNCHRONIZATION
Quantitative Biology - Cell Behavior
Adaptation and Self-Organizing Systems (nlin.AO)
CIENCIAS NATURALES Y EXACTAS
Signal Transduction
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- CONICET Digital (CONICET), Consejo Nacional de Investigaciones Científicas y Técnicas, instacron:CONICET, Physical Review E
- Accession number :
- edsair.doi.dedup.....fa8d6fc402f40ec078a0edfaf4d6b4b0
- Full Text :
- https://doi.org/10.48550/arxiv.1803.09071