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A novel pyroptosis-related lncRNA signature for prognostic prediction in patients with lung adenocarcinoma
- Source :
- Bioengineered, Vol 12, Iss 1, Pp 5932-5949 (2021), Bioengineered, article-version (VoR) Version of Record
- Publication Year :
- 2021
- Publisher :
- Taylor & Francis Group, 2021.
-
Abstract
- Lung adenocarcinoma (LUAD) has been the major cause of tumor-associated mortality in recent years and has a poor prognosis. Pyroptosis is regulated via the activation of inflammasomes and participates in tumorigenesis. However, the effects of pyroptosis-related lncRNAs (PRlncRNAs) on LUAD have not yet been completely elucidated. Therefore, we attempted to systematically explore patterns of cell pyroptosis to establish a novel signature for predicting LUAD survival. Based on TCGA database, we set up a prognostic model by incorporating PRlncRNAs with differential expression using Cox regression and LASSO regression. Kaplan–Meier analysis was conducted to compare the survival of LUAD patients. We further simplified the risk model and created a nomogram to enhance the prediction of LUAD prognosis. Altogether, 84 PRlncRNAs with differential expression were discovered. Subsequently, a new risk model was constructed based on five PRlncRNAs, GSEC, FAM83A-AS1, AL606489.1, AL034397.3 and AC010980.2. The proposed signature exhibited good performance in prognostic prediction and was related to immunocyte infiltration. The nomogram exactly forecasted the overall survival of patients and had excellent clinical utility. In the present study, the five-lncRNA prognostic risk signature and nomogram are trustworthy and effective indicators for predicting the prognosis of LUAD.<br />Graphical abstract
- Subjects :
- Male
Oncology
medicine.medical_specialty
Lung Neoplasms
Prognostic prediction
Adenocarcinoma of Lung
Bioengineering
Applied Microbiology and Biotechnology
Cell Line, Tumor
Internal medicine
Databases, Genetic
medicine
Humans
In patient
prognostic signature
tcga
Aged
Lung
Proportional hazards model
business.industry
pyroptosis
Pyroptosis
Computational Biology
General Medicine
bioinformatics
Middle Aged
Nomogram
Prognosis
medicine.disease
lung adenocarcinoma
medicine.anatomical_structure
lncrna
Prognostic model
Adenocarcinoma
Female
RNA, Long Noncoding
Transcriptome
business
TP248.13-248.65
Research Article
Research Paper
Biotechnology
Subjects
Details
- Language :
- English
- ISSN :
- 21655987 and 21655979
- Volume :
- 12
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Bioengineered
- Accession number :
- edsair.doi.dedup.....fd162166beda8ae4b1012ba4d6f26424