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An Evaluation of the THIN Database in the OMOP Common Data Model for Active Drug Safety Surveillance
- Source :
- Drug Safety. 36:119-134
- Publication Year :
- 2013
- Publisher :
- Springer Science and Business Media LLC, 2013.
-
Abstract
- There has been increased interest in using multiple observational databases to understand the safety profile of medical products during the postmarketing period. However, it is challenging to perform analyses across these heterogeneous data sources. The Observational Medical Outcome Partnership (OMOP) provides a Common Data Model (CDM) for organizing and standardizing databases. OMOP’s work with the CDM has primarily focused on US databases. As a participant in the OMOP Extended Consortium, we implemented the OMOP CDM on the UK Electronic Healthcare Record database—The Health Improvement Network (THIN). The aim of the study was to evaluate the implementation of the THIN database in the OMOP CDM and explore its use for active drug safety surveillance. Following the OMOP CDM specification, the raw THIN database was mapped into a CDM THIN database. Ten Drugs of Interest (DOI) and nine Health Outcomes of Interest (HOI), defined and focused by the OMOP, were created using the CDM THIN database. Quantitative comparison of raw THIN to CDM THIN was performed by execution and analysis of OMOP standardized reports and additional analyses. The practical value of CDM THIN for drug safety and pharmacoepidemiological research was assessed by implementing three analysis methods: Proportional Reporting Ratio (PRR), Univariate Self-Case Control Series (USCCS) and High-Dimensional Propensity Score (HDPS). A published study using raw THIN data was selected to examine the external validity of CDM THIN. Overall demographic characteristics were the same in both databases. Mapping medical and drug codes into the OMOP terminology dictionary was incomplete: 25 % medical codes and 55 % drug codes in raw THIN were not listed in the OMOP terminology dictionary, representing 6 % condition occurrence counts, 4 % procedure occurrence counts and 7 % drug exposure counts in raw THIN. Seven DOIs had
- Subjects :
- Pharmacology
Safety surveillance
Data collection
Databases, Factual
Database
business.industry
Data Collection
Univariate
MEDLINE
Medical classification
Toxicology
computer.software_genre
United Kingdom
External validity
Adverse Drug Reaction Reporting Systems
Electronic Health Records
Humans
Medicine
Upper gastrointestinal
Pharmacology (medical)
Observational study
business
computer
Subjects
Details
- ISSN :
- 11791942 and 01145916
- Volume :
- 36
- Database :
- OpenAIRE
- Journal :
- Drug Safety
- Accession number :
- edsair.doi.dedup.....fec1e523214243937560a9fe95a263c4
- Full Text :
- https://doi.org/10.1007/s40264-012-0009-3