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DNA origami design and implementation

Authors :
Popa, Laura Ioana
Dobre, Ana-Maria
Itcus, Corina
Amarioarei, Alexandru
Paun, Andrei
Paun, Mihaela
Pop, Felician
Tusa, Iris
Minh-Kha Nguyen
Kuzyk, Anton
Czeizler, Eugen
University of Bucharest
National Institute of Research and Development for Biological Sciences
Filara Biomed Srl
Department of Neuroscience and Biomedical Engineering
Åbo Akademi University
Aalto-yliopisto
Aalto University
Publication Year :
2020
Publisher :
Ars Docendi, 2020.

Abstract

Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software - PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.

Details

Language :
English
Database :
OpenAIRE
Accession number :
edsair.od.......661..3a9bef572ad5de70430350f7c423e4c9