Back to Search Start Over

Diversity and population structure of the Ralstonia solanacearum species complex in the South-West Indian Ocean islands

Authors :
Yahiaoui, Noura
Cheron, Jean-Jacques
Dianzinga, Niry Tiana
Chesneau, Thomas
Brutus, Samuel
Petrousse, Bobb
Benimadhu, S.
Jeetah, Rajan
Hamza, Abdou Azali
Jaufeerally-Fakim, Yasmina
Félicité, Jérôme
Cottineau, Jean Sébastien
Fillâtre, Jacques
Hostachy, Bruno
Cellier, Gilles
Prior, Philippe
Poussier, Stéphane
Source :
Book of abstracts of the 6th International Bacterial Wilt Symposium
Publication Year :
2016
Publisher :
INRA, 2016.

Abstract

The Ralstonia solanacearum species complex (Rssc) encompasses strains that are highly destructive worldwide on a wide hast range. This soilborne bacterial plant pathogen invades the roots and colonizes the xylem vessels causing bacterial wilt (BW) diseases. Strains are distributed into four phylogenetic groups, called phylotypes, differing in geographical origin of the strains: phylotype I (Asia), phylotype II (America), phylotype III (Africa) and phylotype IV (Australia - lndonesia - Japan). Each phylotype is subdivided into sequevars based on partial sequencing of the endoglucanase (egl) gene (Fegan and Prior, 2005). In the South-West lndian Ocean (SWIO) islands, although the Rssc is regularly reported no recent data is available about its genetic diversity and population structure. To thoroughly analyze the genetic diversity of the Rssc in the SWIO, we collected a significant collection of Rssc strains mainly from Solanaceae: Reunion (n=789, 41 sites), Mauritius (n=785, 30 sites), Rodrigues (n=S1, 3 sites), Mayotte (n=166, 24 sites), Seychelles (n=92, 9 sites) and Comoros (n=S, to be completed). Using the Multiplex-PCR (Fegan and Prior, 2005), we revealed that the four phylotypes are present with variable distribution depending on the SWIO islands and variable proportions: phylotype 1 (86.7%), phylotype II (9.7%), phylotype Ill (3.5%) and two strains from phylotype IV (0.1%). Partial egl sequencing based on a selection of strains that covered the geographic and hast diversity showed the unexpected overrepresentation of one sequevar (1-31). Further characterizations are ongoing through (i) a MLSA/MLST (Multilocus sequence analysis/typing) based on partial amplification of 7 genes (gdhA, mutS, adK, feus, rp/B, gyrB, and egl) and (ii) the development of a new MLVA (Multilocus variable number of tandem repeat analysis) scheme. Results of bath approaches will be discussed du ring the presentation.

Subjects

Subjects :
H20 - Maladies des plantes

Details

Language :
English
Database :
OpenAIRE
Journal :
Book of abstracts of the 6th International Bacterial Wilt Symposium
Accession number :
edsair.od......3631..05f2fa0362eab47f420dc8d526873b36