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Rethinking Metadynamics: from bias potentials to probability distributions

Authors :
Invernizzi, Michele
Parrinello, Michele
Publication Year :
2019

Abstract

Metadynamics is an enhanced sampling method of great popularity, based on the on-the-fly construction of a bias potential that is function of a selected number of collective variables. We propose here a change in perspective that shifts the focus from the bias to the probability distribution reconstruction, while keeping some of the key characteristics of metadynamics, such as the flexible on-the-fly adjustments to the free energy estimate. The result is an enhanced sampling method that presents a drastic improvement in convergence speed, especially when dealing with suboptimal and/or multidimensional sets of collective variables. The method is especially robust and easy to use, in fact it requires only few simple parameters to be set, and it has a straightforward reweighting scheme to recover the statistics of the unbiased ensemble. Furthermore it gives more control on the desired exploration of the phase space, since the deposited bias is not allowed to grow indefinitely and it does not push the simulation to uninteresting high free energy regions. We demonstrate the performance of the method in a number of representative examples.

Subjects

Subjects :
Physics - Computational Physics

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.1909.07250
Document Type :
Working Paper
Full Text :
https://doi.org/10.1021/acs.jpclett.0c00497