Combinatorial Analysis for Pseudoknot RNA with Complex Structure

There exists many complicated $k$-noncrossing pseudoknot RNA structures in nature based on some special conditions. The special characteristic of RNA structures gives us great challenges in researching the enumeration, prediction and the analysis of prediction algorithm. We will study two kinds of typical $k$-noncrossing pseudoknot RNAs with complex structures separately.
Comment: 117 pages, 79 figures. The thesis has been defended and published in summer of 2012. This version is updated for correcting several unmeant mistakes and clerical error. It is very thankful for Prof. Christian Reidys and Prof. Qinghu Hou's guidance