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Forming Local Intersections of Projections for Classifying and Searching Histopathology Images

Authors :
Sriram, Aditya
Kalra, Shivam
Babaie, Morteza
Kieffer, Brady
Drobi, Waddah Al
Rahnamayan, Shahryar
Kashani, Hany
Tizhoosh, Hamid R.
Publication Year :
2020

Abstract

In this paper, we propose a novel image descriptor called Forming Local Intersections of Projections (FLIP) and its multi-resolution version (mFLIP) for representing histopathology images. The descriptor is based on the Radon transform wherein we apply parallel projections in small local neighborhoods of gray-level images. Using equidistant projection directions in each window, we extract unique and invariant characteristics of the neighborhood by taking the intersection of adjacent projections. Thereafter, we construct a histogram for each image, which we call the FLIP histogram. Various resolutions provide different FLIP histograms which are then concatenated to form the mFLIP descriptor. Our experiments included training common networks from scratch and fine-tuning pre-trained networks to benchmark our proposed descriptor. Experiments are conducted on the publicly available dataset KIMIA Path24 and KIMIA Path960. For both of these datasets, FLIP and mFLIP descriptors show promising results in all experiments.Using KIMIA Path24 data, FLIP outperformed non-fine-tuned Inception-v3 and fine-tuned VGG16 and mFLIP outperformed fine-tuned Inception-v3 in feature extracting.<br />Comment: To appear in International Conference on AI in Medicine (AIME 2020)

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.2008.03553
Document Type :
Working Paper