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Learn like a Pathologist: Curriculum Learning by Annotator Agreement for Histopathology Image Classification

Authors :
Wei, Jerry
Suriawinata, Arief
Ren, Bing
Liu, Xiaoying
Lisovsky, Mikhail
Vaickus, Louis
Brown, Charles
Baker, Michael
Nasir-Moin, Mustafa
Tomita, Naofumi
Torresani, Lorenzo
Wei, Jason
Hassanpour, Saeed
Publication Year :
2020

Abstract

Applying curriculum learning requires both a range of difficulty in data and a method for determining the difficulty of examples. In many tasks, however, satisfying these requirements can be a formidable challenge. In this paper, we contend that histopathology image classification is a compelling use case for curriculum learning. Based on the nature of histopathology images, a range of difficulty inherently exists among examples, and, since medical datasets are often labeled by multiple annotators, annotator agreement can be used as a natural proxy for the difficulty of a given example. Hence, we propose a simple curriculum learning method that trains on progressively-harder images as determined by annotator agreement. We evaluate our hypothesis on the challenging and clinically-important task of colorectal polyp classification. Whereas vanilla training achieves an AUC of 83.7% for this task, a model trained with our proposed curriculum learning approach achieves an AUC of 88.2%, an improvement of 4.5%. Our work aims to inspire researchers to think more creatively and rigorously when choosing contexts for applying curriculum learning.

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.2009.13698
Document Type :
Working Paper