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Mitosis domain generalization in histopathology images -- The MIDOG challenge

Authors :
Aubreville, Marc
Stathonikos, Nikolas
Bertram, Christof A.
Klopleisch, Robert
ter Hoeve, Natalie
Ciompi, Francesco
Wilm, Frauke
Marzahl, Christian
Donovan, Taryn A.
Maier, Andreas
Breen, Jack
Ravikumar, Nishant
Chung, Youjin
Park, Jinah
Nateghi, Ramin
Pourakpour, Fattaneh
Fick, Rutger H. J.
Hadj, Saima Ben
Jahanifar, Mostafa
Rajpoot, Nasir
Dexl, Jakob
Wittenberg, Thomas
Kondo, Satoshi
Lafarge, Maxime W.
Koelzer, Viktor H.
Liang, Jingtang
Wang, Yubo
Long, Xi
Liu, Jingxin
Razavi, Salar
Khademi, April
Yang, Sen
Wang, Xiyue
Veta, Mitko
Breininger, Katharina
Source :
Medical Image Analysis 84 (2023) 102699
Publication Year :
2022

Abstract

The density of mitotic figures within tumor tissue is known to be highly correlated with tumor proliferation and thus is an important marker in tumor grading. Recognition of mitotic figures by pathologists is known to be subject to a strong inter-rater bias, which limits the prognostic value. State-of-the-art deep learning methods can support the expert in this assessment but are known to strongly deteriorate when applied in a different clinical environment than was used for training. One decisive component in the underlying domain shift has been identified as the variability caused by using different whole slide scanners. The goal of the MICCAI MIDOG 2021 challenge has been to propose and evaluate methods that counter this domain shift and derive scanner-agnostic mitosis detection algorithms. The challenge used a training set of 200 cases, split across four scanning systems. As a test set, an additional 100 cases split across four scanning systems, including two previously unseen scanners, were given. The best approaches performed on an expert level, with the winning algorithm yielding an F_1 score of 0.748 (CI95: 0.704-0.781). In this paper, we evaluate and compare the approaches that were submitted to the challenge and identify methodological factors contributing to better performance.<br />Comment: 19 pages, 9 figures, summary paper of the 2021 MICCAI MIDOG challenge

Details

Database :
arXiv
Journal :
Medical Image Analysis 84 (2023) 102699
Publication Type :
Report
Accession number :
edsarx.2204.03742
Document Type :
Working Paper
Full Text :
https://doi.org/10.1016/j.media.2022.102699