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Skipping the Replica Exchange Ladder with Normalizing Flows

Authors :
Invernizzi, Michele
Krämer, Andreas
Clementi, Cecilia
Noé, Frank
Publication Year :
2022

Abstract

We combine replica exchange (parallel tempering) with normalizing flows, a class of deep generative models. These two sampling strategies complement each other, resulting in an efficient strategy for sampling molecular systems characterized by rare events, which we call learned replica exchange (LREX). In LREX, a normalizing flow is trained to map the configurations of the fastest-mixing replica into configurations belonging to the target distribution, allowing direct exchanges between the two without the need to simulate intermediate replicas. This can significantly reduce the computational cost compared to standard replica exchange. The proposed method also offers several advantages with respect to Boltzmann generators that directly use normalizing flows to sample the target distribution. We apply LREX to some prototypical molecular dynamics systems, highlighting the improvements over previous methods.

Subjects

Subjects :
Physics - Computational Physics

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.2210.14104
Document Type :
Working Paper
Full Text :
https://doi.org/10.1021/acs.jpclett.2c03327