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Magic sizes enable minimal-complexity, high-fidelity assembly of programmable shells

Authors :
Tyukodi, Botond
Hayakawa, Daichi
Hall, Douglas M.
Rogers, W. Benjamin
Grason, Gregory M.
Hagan, Michael F.
Publication Year :
2024

Abstract

Recent advances in synthetic methods enable designing subunits that self-assemble into structures with well-defined sizes and architectures, but yields are frequently suppressed by the formation of off-target metastable structures. Increasing the complexity (number of distinct inter-subunit interaction types) can inhibit off-target structures, but leads to slower kinetics and higher synthesis costs. Here, we use icosahedral shells formed of programmable triangular subunits as a model system, and identify design principles that produce the highest target yield at the lowest complexity. We use a symmetry-based construction to create a range of design complexities, starting from the maximal symmetry Caspar-Klug assembly up to the fully addressable, zero-symmetry assembly. Kinetic Monte Carlo simulations reveal that the most prominent defects leading to off-target assemblies are a class of disclinations. We derive symmetry-based rules for identifying the optimal (lowest-complexity, highest-symmetry) design that inhibits these disclinations, leading to robust, high-fidelity assembly of targets with arbitrarily large sizes. Optimal complexity varies non-monotonically with target size, with `magic' sizes appearing for high-symmetry designs in which symmetry axes do not intersect vertices of the triangular net. The optimal designs at magic sizes require $12$ times fewer inequivalent interaction-types than the (minimal symmetry) fully addressable construction.<br />Comment: 5 pages, 4 figures. SI.pdf with additional information provided

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.2411.03720
Document Type :
Working Paper