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Identification of the RSX interactome in a marsupial shows functional coherence with the Xist interactome during X inactivation

Authors :
Kim L. McIntyre
Shafagh A. Waters
Ling Zhong
Gene Hart-Smith
Mark Raftery
Zahra A. Chew
Hardip R. Patel
Jennifer A. Marshall Graves
Paul D. Waters
Source :
Genome Biology, Vol 25, Iss 1, Pp 1-19 (2024)
Publication Year :
2024
Publisher :
BMC, 2024.

Abstract

Abstract The marsupial specific RSX lncRNA is the functional analogue of the eutherian specific XIST, which coordinates X chromosome inactivation. We characterized the RSX interactome in a marsupial representative (the opossum Monodelphis domestica), identifying 135 proteins, of which 54 had orthologues in the XIST interactome. Both interactomes were enriched for biological pathways related to RNA processing, regulation of translation, and epigenetic transcriptional silencing. This represents a remarkable example showcasing the functional coherence of independently evolved lncRNAs in distantly related mammalian lineages.

Details

Language :
English
ISSN :
1474760X
Volume :
25
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Genome Biology
Publication Type :
Academic Journal
Accession number :
edsdoj.060615f1445d423c8851ce816efb87ee
Document Type :
article
Full Text :
https://doi.org/10.1186/s13059-024-03280-0