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Genome sequence of the model plant pathogen Pectobacterium carotovorum SCC1
- Source :
- Standards in Genomic Sciences, Vol 12, Iss 1, Pp 1-8 (2017)
- Publication Year :
- 2017
- Publisher :
- BMC, 2017.
-
Abstract
- Abstract Bacteria of the genus Pectobacterium are economically important plant pathogens that cause soft rot disease on a wide variety of plant species. Here, we report the genome sequence of Pectobacterium carotovorum strain SCC1, a Finnish soft rot model strain isolated from a diseased potato tuber in the early 1980’s. The genome of strain SCC1 consists of one circular chromosome of 4,974,798 bp and one circular plasmid of 5524 bp. In total 4451 genes were predicted, of which 4349 are protein coding and 102 are RNA genes.
- Subjects :
- Pectobacterium
Soft rot
Plant pathogen
Necrotroph
Potato
Finland
Genetics
QH426-470
Subjects
Details
- Language :
- English
- ISSN :
- 19443277
- Volume :
- 12
- Issue :
- 1
- Database :
- Directory of Open Access Journals
- Journal :
- Standards in Genomic Sciences
- Publication Type :
- Academic Journal
- Accession number :
- edsdoj.1c4e49f7e76b4a13b4878691fe0b679f
- Document Type :
- article
- Full Text :
- https://doi.org/10.1186/s40793-017-0301-z