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Efficient computation and statistical assessment of transfer entropy

Authors :
Patrick eBoba
Dominik eBollmann
Daniel eSchoepe
Nora eWester
Jan eWiesel
Kay eHamacher
Source :
Frontiers in Physics, Vol 3 (2015)
Publication Year :
2015
Publisher :
Frontiers Media S.A., 2015.

Abstract

The analysis of complex systems frequently poses the challenge to distinguish correlation from causation. Statistical physics hasinspired very promising approaches to search for correlations in time series; the transfer entropy in particular (Hlavackova-Schindler et al., 2007). Now, methods from computational statistics can quantitatively assign significance to such correlation measures. In this study, we propose and apply a procedure to statistically assess transfer entropies by one-sided tests. We introduce to null models of vanishing correlations for time series with memory.We implemented them in an OpenMP-based, parallelized C++ package for multi-core CPUs. Using template meta-programming, we enable a compromise between memory and run time efficiency.

Details

Language :
English
ISSN :
2296424X
Volume :
3
Database :
Directory of Open Access Journals
Journal :
Frontiers in Physics
Publication Type :
Academic Journal
Accession number :
edsdoj.1f88e9d8e33e4e4ebeb3e1db62bb5f9b
Document Type :
article
Full Text :
https://doi.org/10.3389/fphy.2015.00010