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The complete chloroplast genome sequence of Cinnamomum longipetiolatum
- Source :
- Mitochondrial DNA. Part B. Resources, Vol 5, Iss 1, Pp 198-199 (2020)
- Publication Year :
- 2020
- Publisher :
- Taylor & Francis Group, 2020.
-
Abstract
- The first complete chloroplast genome (cpDNA) sequence of Cinnamomum longipetiolatum was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 158,603 bp in length, contains a large single copy region (LSC) of 89,386 bp and a small single copy region (SSC) of 18,181 bp, which were separated by a pair of inverted repeats (IR) regions of 25,511 bp. The genome contains 129 genes, including 84 protein-coding genes, eight ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 39.0%, and the corresponding values of the LSC, SSC, and IR regions are 37.7%, 33.9%, and 43.0%, respectively. Further phylogenomic analysis showed that C. longipetiolatum clustered in a clade in genus Cinnamomum.
Details
- Language :
- English
- ISSN :
- 23802359
- Volume :
- 5
- Issue :
- 1
- Database :
- Directory of Open Access Journals
- Journal :
- Mitochondrial DNA. Part B. Resources
- Publication Type :
- Academic Journal
- Accession number :
- edsdoj.33c3fc91e7654a5cb4ff73d847e79489
- Document Type :
- article
- Full Text :
- https://doi.org/10.1080/23802359.2019.1698994