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The complete chloroplast genome sequence of Cinnamomum longipetiolatum

Authors :
Yuan Zheng
Yana Luo
Yunqing Li
Yi Wang
Source :
Mitochondrial DNA. Part B. Resources, Vol 5, Iss 1, Pp 198-199 (2020)
Publication Year :
2020
Publisher :
Taylor & Francis Group, 2020.

Abstract

The first complete chloroplast genome (cpDNA) sequence of Cinnamomum longipetiolatum was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 158,603 bp in length, contains a large single copy region (LSC) of 89,386 bp and a small single copy region (SSC) of 18,181 bp, which were separated by a pair of inverted repeats (IR) regions of 25,511 bp. The genome contains 129 genes, including 84 protein-coding genes, eight ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 39.0%, and the corresponding values of the LSC, SSC, and IR regions are 37.7%, 33.9%, and 43.0%, respectively. Further phylogenomic analysis showed that C. longipetiolatum clustered in a clade in genus Cinnamomum.

Details

Language :
English
ISSN :
23802359
Volume :
5
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Mitochondrial DNA. Part B. Resources
Publication Type :
Academic Journal
Accession number :
edsdoj.33c3fc91e7654a5cb4ff73d847e79489
Document Type :
article
Full Text :
https://doi.org/10.1080/23802359.2019.1698994