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Genetic diversity and biogeography of T. officinale inferred from multi locus sequence typing approach.

Authors :
Mohammadjavad Jafari
Waheed Akram
Yanju Pang
Aqeel Ahmad
Shakeel Ahmed
Nasim Ahmad Yasin
Tehmina Anjum
Basharat Ali
Xiangdong Hu
Xiaohua Li
Shuang Dong
Qian Cai
Matteo Ciprian
Monika Bielec
Sheng Hu
Fatemeh Sefidkon
Xuebo Hu
Source :
PLoS ONE, Vol 13, Iss 9, p e0203275 (2018)
Publication Year :
2018
Publisher :
Public Library of Science (PLoS), 2018.

Abstract

Taraxacum officinale (Asteraceae) is widely distributed weedy plant used as a traditional medicinal herb. The population genetics and historical biogeography of this plant have remained relatively unexplored. This study explores phylogeny, population genetics and ancestral reconstructions adopting multi locus sequence typing (MLST) approach. MLST sequences dataset was generated from genomics and chloroplast DNA sequences obtained from 31 T. officinale haplotypes located in 16 different countries. Phylogenetic analysis distributed these haplotypes in well differentiated geographic clades. The study suggested a close relationship between Europe and adjacent Asian countries. Populations of these regions predominantly formed common haplogroups, showed considerable level of gene flow and evidence for recombination events across European and Asian population. Biogeographical inferences obtained by applying statistical dispersal-vicariance analysis (S-DIVA) and Bayesian binary MCMC (BBM) analysis showed that T. officinale was putatively originated in Europe. Molecular clock analysis based on ITS dataset suggested that the divergence between Europe and East Asian populations can be dated to 1.07 Mya with subsequent dispersal and vicariance events. Among different spatial process long distance seed dispersal mediated by wind had potentially assisted the population expansion of T. officinale.

Subjects

Subjects :
Medicine
Science

Details

Language :
English
ISSN :
19326203
Volume :
13
Issue :
9
Database :
Directory of Open Access Journals
Journal :
PLoS ONE
Publication Type :
Academic Journal
Accession number :
edsdoj.3d0aa4a73da747e9b1ceea6482ed874b
Document Type :
article
Full Text :
https://doi.org/10.1371/journal.pone.0203275