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Genome-wide association studies of human and rat BMI converge on synapse, epigenome, and hormone signaling networks

Authors :
Sarah N. Wright
Brittany S. Leger
Sara Brin Rosenthal
Sophie N. Liu
Tongqiu Jia
Apurva S. Chitre
Oksana Polesskaya
Katie Holl
Jianjun Gao
Riyan Cheng
Angel Garcia Martinez
Anthony George
Alexander F. Gileta
Wenyan Han
Alesa H. Netzley
Christopher P. King
Alexander Lamparelli
Connor Martin
Celine L. St. Pierre
Tengfei Wang
Hannah Bimschleger
Jerry Richards
Keita Ishiwari
Hao Chen
Shelly B. Flagel
Paul Meyer
Terry E. Robinson
Leah C. Solberg Woods
Jason F. Kreisberg
Trey Ideker
Abraham A. Palmer
Source :
Cell Reports, Vol 42, Iss 8, Pp 112873- (2023)
Publication Year :
2023
Publisher :
Elsevier, 2023.

Abstract

Summary: A vexing observation in genome-wide association studies (GWASs) is that parallel analyses in different species may not identify orthologous genes. Here, we demonstrate that cross-species translation of GWASs can be greatly improved by an analysis of co-localization within molecular networks. Using body mass index (BMI) as an example, we show that the genes associated with BMI in humans lack significant agreement with those identified in rats. However, the networks interconnecting these genes show substantial overlap, highlighting common mechanisms including synaptic signaling, epigenetic modification, and hormonal regulation. Genetic perturbations within these networks cause abnormal BMI phenotypes in mice, too, supporting their broad conservation across mammals. Other mechanisms appear species specific, including carbohydrate biosynthesis (humans) and glycerolipid metabolism (rodents). Finally, network co-localization also identifies cross-species convergence for height/body length. This study advances a general paradigm for determining whether and how phenotypes measured in model species recapitulate human biology.

Details

Language :
English
ISSN :
22111247
Volume :
42
Issue :
8
Database :
Directory of Open Access Journals
Journal :
Cell Reports
Publication Type :
Academic Journal
Accession number :
edsdoj.40d23e0993024b1ea31e653650c9f892
Document Type :
article
Full Text :
https://doi.org/10.1016/j.celrep.2023.112873