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Out-of-Equilibrium Collective Oscillation as Phonon Condensation in a Model Protein

Authors :
Ilaria Nardecchia
Jeremie Torres
Mathias Lechelon
Valeria Giliberti
Michele Ortolani
Philippe Nouvel
Matteo Gori
Yoann Meriguet
Irene Donato
Jordane Preto
Luca Varani
James Sturgis
Marco Pettini
Source :
Physical Review X, Vol 8, Iss 3, p 031061 (2018)
Publication Year :
2018
Publisher :
American Physical Society, 2018.

Abstract

We describe the activation of out-of-equilibrium collective oscillations of a macromolecule as a classical phonon condensation phenomenon. If a macromolecule is modeled as an open system—that is, it is subjected to an external energy supply and is in contact with a thermal bath to dissipate the excess energy—the internal nonlinear couplings among the normal modes make the system undergo a nonequilibrium phase transition when the energy input rate exceeds a threshold value. This transition takes place between a state where the energy is incoherently distributed among the normal modes and a state where the input energy is channeled into the lowest-frequency mode entailing a coherent oscillation of the entire molecule. The model put forward in the present work is derived as the classical counterpart of a quantum model proposed a long time ago by Fröhlich in an attempt to explain the huge speed of enzymatic reactions. We show that such a phenomenon is actually possible. Two different and complementary THz near-field spectroscopic techniques—a plasmonic rectenna and a microwire near-field probe—have been used in two different labs to eliminate artifacts. By considering an aqueous solution of a model protein, the bovine serum albumin, we find that this protein displays a remarkable absorption feature around 0.314 THz, when driven in a stationary out-of-thermal equilibrium state by means of optical pumping. The experimental outcomes are in very good qualitative agreement with the theory developed in the first part of the paper and in excellent quantitative agreement with the theoretical result, allowing us to identify the observed spectral feature with a collective oscillation of the entire molecule.

Subjects

Subjects :
Physics
QC1-999

Details

Language :
English
ISSN :
21603308
Volume :
8
Issue :
3
Database :
Directory of Open Access Journals
Journal :
Physical Review X
Publication Type :
Academic Journal
Accession number :
edsdoj.4d0de9da12d04cf0a3f9e2c86490d39c
Document Type :
article
Full Text :
https://doi.org/10.1103/PhysRevX.8.031061