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Prevalence and detection of low-allele-fraction variants in clinical cancer samples

Authors :
Hyun-Tae Shin
Yoon-La Choi
Jae Won Yun
Nayoung K. D. Kim
Sook-Young Kim
Hyo Jeong Jeon
Jae-Yong Nam
Chung Lee
Daeun Ryu
Sang Cheol Kim
Kyunghee Park
Eunjin Lee
Joon Seol Bae
Dae Soon Son
Je-Gun Joung
Jeeyun Lee
Seung Tae Kim
Myung-Ju Ahn
Se-Hoon Lee
Jin Seok Ahn
Woo Yong Lee
Bo Young Oh
Yeon Hee Park
Jeong Eon Lee
Kwang Hyuk Lee
Hee Cheol Kim
Kyoung-Mee Kim
Young-Hyuck Im
Keunchil Park
Peter J. Park
Woong-Yang Park
Source :
Nature Communications, Vol 8, Iss 1, Pp 1-10 (2017)
Publication Year :
2017
Publisher :
Nature Portfolio, 2017.

Abstract

High-throughput sequencing is used to identify somatic variants in cancer patients. Here, the authors perform panel-based profiling of 5095 clinical samples and demonstrate that many clinically-actionable variants have low variant allele fractions, requiring assays with high detection sensitivity.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
8
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.58ebe12efcc4384b527ed8e88824f94
Document Type :
article
Full Text :
https://doi.org/10.1038/s41467-017-01470-y