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Characterization of the complete Salix viminalis var. gmelinii Turcz 1854 chloroplast genome from the northeast of China

Authors :
Jie Wan
Huijie Tang
Zicheng Yu
Jing Wang
Xu Yao
Xiaoping Li
Source :
Mitochondrial DNA. Part B. Resources, Vol 7, Iss 10, Pp 1768-1770 (2022)
Publication Year :
2022
Publisher :
Taylor & Francis Group, 2022.

Abstract

The Salix viminalis var. gmelinii Turcz 1854 is a variant of the Salix genus, from the Salicaceae family, and possesses an extremely high economic value. In this study the complete chloroplast genome of the woody plant S. viminalis var. gmelinii was characterized for the first time using a high-throughput approach in conjunction with de novo assembly technology. The S.viminalis var. gmelinii chloroplast genome is 155,405 base pairs (bp) in length and contains 36.71% GC content. It incorporates a large single-copy region (LSC, 84,287bp) alongside one small-copy region (SSC, 16,198bp), and two inverted repeat regions (IRA and IRB, 27,460bp). Moreover, this chloroplast genome encodes 128 genes, which comprises 83 protein-coding genes, 37 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. Furthermore, the phylogenetic analysis revealed that S.viminalis var. gmelinii is closely related to S. cupularis and S.gordejevii.

Details

Language :
English
ISSN :
23802359
Volume :
7
Issue :
10
Database :
Directory of Open Access Journals
Journal :
Mitochondrial DNA. Part B. Resources
Publication Type :
Academic Journal
Accession number :
edsdoj.67a718bf8f934af3bb3b11acd33b721b
Document Type :
article
Full Text :
https://doi.org/10.1080/23802359.2022.2127337