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Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor

Authors :
Sompong O-Thong
Peerawat Khongkliang
Chonticha Mamimin
Apinya Singkhala
Poonsuk Prasertsan
Nils-Kåre Birkeland
Source :
Genomics Data, Vol 12, Iss C, Pp 49-51 (2017)
Publication Year :
2017
Publisher :
Elsevier, 2017.

Abstract

Thermoanaerobacterium sp. strain PSU-2 was isolated from thermophilic hydrogen producing reactor and subjected to draft genome sequencing on 454 pyrosequencing and annotated on RAST. The draft genome sequence of strain PSU-2 contains 2,552,497 bases with an estimated G + C content of 35.2%, 2555 CDS, 8 rRNAs and 57 tRNAs. The strain had a number of genes responsible for carbohydrates metabolic, amino acids and derivatives, and protein metabolism of 17.7%, 14.39% and 9.81%, respectively. Strain PSU-2 also had gene responsible for hydrogen biosynthesis as well as the genes related to Ni-Fe hydrogenase. Comparative genomic analysis indicates strain PSU-2 shares about 94% genome sequence similarity with Thermoanaerobacterium xylanolyticum LX-11. The nucleotide sequence of this draft genome was deposited into DDBJ/ENA/GenBank under the accession MSQD00000000.

Details

Language :
English
ISSN :
22135960
Volume :
12
Issue :
C
Database :
Directory of Open Access Journals
Journal :
Genomics Data
Publication Type :
Academic Journal
Accession number :
edsdoj.690f60bea141188606031cf14a96b3
Document Type :
article
Full Text :
https://doi.org/10.1016/j.gdata.2017.02.012