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Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950–Metabolites in Frozen Human Plasma[S]

Authors :
John A. Bowden
Alan Heckert
Candice Z. Ulmer
Christina M. Jones
Jeremy P. Koelmel
Laila Abdullah
Linda Ahonen
Yazen Alnouti
Aaron M. Armando
John M. Asara
Takeshi Bamba
John R. Barr
Jonas Bergquist
Christoph H. Borchers
Joost Brandsma
Susanne B. Breitkopf
Tomas Cajka
Amaury Cazenave-Gassiot
Antonio Checa
Michelle A. Cinel
Romain A. Colas
Serge Cremers
Edward A. Dennis
James E. Evans
Alexander Fauland
Oliver Fiehn
Michael S. Gardner
Timothy J. Garrett
Katherine H. Gotlinger
Jun Han
Yingying Huang
Aveline Huipeng Neo
Tuulia Hyötyläinen
Yoshihiro Izumi
Hongfeng Jiang
Houli Jiang
Jiang Jiang
Maureen Kachman
Reiko Kiyonami
Kristaps Klavins
Christian Klose
Harald C. Köfeler
Johan Kolmert
Therese Koal
Grielof Koster
Zsuzsanna Kuklenyik
Irwin J. Kurland
Michael Leadley
Karen Lin
Krishna Rao Maddipati
Danielle McDougall
Peter J. Meikle
Natalie A. Mellett
Cian Monnin
M. Arthur Moseley
Renu Nandakumar
Matej Oresic
Rainey Patterson
David Peake
Jason S. Pierce
Martin Post
Anthony D. Postle
Rebecca Pugh
Yunping Qiu
Oswald Quehenberger
Parsram Ramrup
Jon Rees
Barbara Rembiesa
Denis Reynaud
Mary R. Roth
Susanne Sales
Kai Schuhmann
Michal Laniado Schwartzman
Charles N. Serhan
Andrej Shevchenko
Stephen E. Somerville
Lisa St. John-Williams
Michal A. Surma
Hiroaki Takeda
Rhishikesh Thakare
J. Will Thompson
Federico Torta
Alexander Triebl
Martin Trötzmüller
S. J. Kumari Ubhayasekera
Dajana Vuckovic
Jacquelyn M. Weir
Ruth Welti
Markus R. Wenk
Craig E. Wheelock
Libin Yao
Min Yuan
Xueqing Heather Zhao
Senlin Zhou
Source :
Journal of Lipid Research, Vol 58, Iss 12, Pp 2275-2288 (2017)
Publication Year :
2017
Publisher :
Elsevier, 2017.

Abstract

As the lipidomics field continues to advance, self-evaluation within the community is critical. Here, we performed an interlaboratory comparison exercise for lipidomics using Standard Reference Material (SRM) 1950–Metabolites in Frozen Human Plasma, a commercially available reference material. The interlaboratory study comprised 31 diverse laboratories, with each laboratory using a different lipidomics workflow. A total of 1,527 unique lipids were measured across all laboratories and consensus location estimates and associated uncertainties were determined for 339 of these lipids measured at the sum composition level by five or more participating laboratories. These evaluated lipids detected in SRM 1950 serve as community-wide benchmarks for intra- and interlaboratory quality control and method validation. These analyses were performed using nonstandardized laboratory-independent workflows. The consensus locations were also compared with a previous examination of SRM 1950 by the LIPID MAPS consortium. While the central theme of the interlaboratory study was to provide values to help harmonize lipids, lipid mediators, and precursor measurements across the community, it was also initiated to stimulate a discussion regarding areas in need of improvement.

Details

Language :
English
ISSN :
00222275
Volume :
58
Issue :
12
Database :
Directory of Open Access Journals
Journal :
Journal of Lipid Research
Publication Type :
Academic Journal
Accession number :
edsdoj.757670a32e84af9bc9bad52c975b5dc
Document Type :
article
Full Text :
https://doi.org/10.1194/jlr.M079012