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Determination of chloroplast genome sequence of Magnolia ofeliae A. Vázquez & Cuevas (Magnoliaceae), an endangered Mexican Magnolia

Authors :
Yoonju Yeo
Suhyun Park
J. Antonio Vázquez-García
Sangtae Kim
Source :
Mitochondrial DNA. Part B. Resources, Vol 5, Iss 4, Pp 3803-3804 (2020)
Publication Year :
2020
Publisher :
Taylor & Francis Group, 2020.

Abstract

Magnolia ofeliae A. Vázquez & Cuevas, a plant species endemic to south Jalisco, Mexico, is a critically endangered (CR) species based on the IUCN Red List. In this study, we assembled its complete chloroplast (cp) genome. The total genome size of M. ofeliae was 159,839 bp including four subregions: a large single-copy (LSC) region of 88,027 bp and a small single-copy (SSC) region of 18,752 bp separated by a pair of identical inverted repeat regions (IRs) of 26,530 bp each. The GC content of the cp genome of M. ofeliae is 39.3%. The cp genome encoded a set of 113 genes, containing 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis results that M. ofeliae is a sister to all other magnolias in the subfamily Magnolioideae.

Details

Language :
English
ISSN :
23802359
Volume :
5
Issue :
4
Database :
Directory of Open Access Journals
Journal :
Mitochondrial DNA. Part B. Resources
Publication Type :
Academic Journal
Accession number :
edsdoj.7ce3219edb7240128bdf4697ed0b6a22
Document Type :
article
Full Text :
https://doi.org/10.1080/23802359.2020.1840930